Glycine soja (wild soybean): 114376340
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Entry
114376340 CDS
T06057
Name
(RefSeq) isoleucine--tRNA ligase, cytoplasmic-like
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
114376340
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
gsj01007
]
114376340
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gsj03016
]
114376340
Enzymes [BR:
gsj01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
114376340
Amino acid related enzymes [BR:
gsj01007
]
Aminoacyl-tRNA synthetase
Class I (U)
114376340
Transfer RNA biogenesis [BR:
gsj03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
114376340
Prokaryotic type
Other AARSs
114376340
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
DUF5915
tRNA-synt_1g
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
114376340
NCBI-ProteinID:
XP_028190227
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Position
11:complement(7188747..7204559)
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AA seq
1182 aa
AA seq
DB search
MDDVCEGKDFTFPKQEEKILDFWSQIDAFHTQLSLTQDKPEYIFYDGPPFATGLPHYGHI
LAGTIKDIVTRYQSMTGHHVTRRFGWDCHGLPVENEIDKKLGIKKREDILKLGIDKYNEE
CRAIVTRYVSEWETVITRTGRWIDFKKDYKTMDLNFMESVWWVFAQLFKKKLVYKGFKVM
PYSTGCKTPLSNFEAGQNYKDVSDPEVFITFPVVGDQDDASFVAWTTTPWTLPSNLALCI
NANFTYVKVRNKYSGKVYIVAESRLSAIHNPKEKPKEAVVNSSNNVPKNINAKTKGASGG
KTENVLDSFEVLEKFSGATLVGTKYEPLFDYFKELSDTAFRIVADNYVTDDSGTGVVHCA
PAFGEDDFRVCIDNQILSKDKLTVAVDDDGCFTEKITDFSGCYIKHADKDIIEAVKAKGR
LVKSGAFTHSYPFCWRSQTPLIYRAVPSWFVRVESLKEKLLENNKKTYWVPDFVKDKRFH
NWLENARDWAISRSRFWGTPLPIWISEDEEEVVVIDSVAKLEELSGVKVFDLHRHNIDHI
TIKSDSGRVLRRVDDVFDCWFESGSMPYAYIHYPFENVELFEKNFPGHFIAEGLDQTRGW
FYTLMVLATALFGKPAFRNLICNGLVLAEDGKKMSKSLKNYPSPTEVINDYGADALRLYL
INSPVVRAEPLRFKKEGVYGVVRDVFLPWYNAYRFLVQNAKRVEVEGLAPFVPFDQATLL
NSTNVLDQWINSATQSLIHFVRQEMDGYRLYTVVPYLLKFLDNLTNIYVRFNRKRLKGRS
GEEDCRIALSTLYHVLLLSCKVMAPFTPFFTEVLYQNMRKVSNGSEESIHYCSFPTEEGR
RGERIEQSVSRMMTIIDLARNIRERHNKPLKTPLREMVIVHPDADFLDDINGKLKEYVLE
ELNVRSLVPCNDTLKYATLRAEPEFSVLGKRLGKSMGIVAKEIKAMSQENILAFENAGEV
VIANQCLKLTDIKVLRDFKRPDGMTEKEVDAAGDGDVLVILDLRPDESLFEAGAAREIVN
RIQKLRKKVALDPTDMVEVYFESLDDDKSVSQRVLHSQESYIRDAIGSQLLPNSLMPAHA
VVLGEERFHGIASMSFGITLTRPALMFNQKAILSLFTGDAKSAYKLQTYLLSRDHLKLKS
EFQDGNGKKIVDSIEQLPAVEVVLGQHVFFTVGDYSLAGKSD
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgtttgcgaaggcaaggacttcacgtttccgaagcaggaggagaagattctg
gacttctggtcccaaatcgacgcattccacactcagctatctctgacgcaagacaagccg
gagtacatcttctacgatggccctcccttcgccaccggcctccctcactacggtcacatc
ctcgccggcacaatcaaggacatcgtcacgcgctaccagtccatgaccggccatcacgtc
acgcgccgcttcggctgggattgccacggcctccccgtcgagaacgagatcgacaagaag
cttggcatcaaaaagcgcgaggacatcctcaagctcggaatcgacaagtacaacgaggag
tgccgcgccatcgtcacgcgctacgtctctgagtgggagaccgtcatcacgcgcaccgga
aggtggatcgactttaagaaagattacaaaaccatggacctcaacttcatggagtccgtc
tggtgggttttcgcccagctgttcaagaaaaaacttgtctataaaggtttcaaggtcatg
ccgtatagcactggctgcaaaacgccgctctctaattttgaggctggtcagaattataag
gatgtatctgatcctgaagtatttatcacgtttccagtcgtgggtgatcaggatgatgca
tcttttgtagcatggacaacgactccatggactcttcctagcaatcttgcactgtgcatc
aatgccaattttacctatgtgaaggttcgcaataagtactctggtaaagtttatattgtt
gctgaatctcgtctgtctgcaatccataaccctaaggagaagcccaaagaagctgttgtt
aatagttcaaataatgttcctaaaaatataaatgcaaaaaccaagggagcttcaggtgga
aaaactgaaaatgtgttggattcttttgaagtgctggagaaattctcaggggcaacatta
gtggggacaaagtatgaaccattatttgattacttcaaggagttatctgatacagctttt
agaattgttgccgacaattatgttaccgacgatagtggtactggtgttgtccattgtgcc
cctgcttttggtgaagatgatttccgtgtttgcattgataatcaaattcttagcaaggat
aaattaactgtagctgttgatgatgatggctgctttactgaaaaaatcactgactttagt
gggtgctacatcaaacatgctgacaaagatatcattgaagctgtaaaggcaaagggtaga
ctggttaaatctggagcttttacacattcttatccattctgctggagatctcagacccct
cttatttacagagctgttccaagctggtttgttagagtggagtcgttgaaagagaaattg
ttggaaaacaataagaagacctactgggtccctgattttgtcaaggataagcgatttcac
aattggctggaaaatgcaagagattgggcaattagtcgtagtagattttgggggacccct
ctccctatatggattagtgaggatgaggaggaagtagttgtcatagattctgttgcaaaa
cttgaagagctttcaggtgtaaaggtgtttgaccttcatcgtcacaacattgatcatatt
acaattaaatctgacagtggccgtgtacttcgacgtgttgatgatgtgtttgactgctgg
tttgagagtggatccatgccgtatgcgtatatccattatccttttgaaaatgttgagctt
tttgagaagaatttccctggccattttattgctgaagggctggatcaaacacgtggttgg
ttttatacccttatggtgctggctactgctttatttggcaagcctgcatttaggaatcta
atctgcaatggactagtcctggccgaagatgggaaaaagatgagtaaaagcttgaaaaat
tatccttcaccgacggaagttattaatgattatggagcggatgccttgcgattgtacctt
atcaactcacctgttgtgcgtgctgagccacttcgtttcaagaaagaaggagtttatggt
gttgttagggatgttttcctcccttggtataatgcatatcggttccttgttcaaaatgca
aagagggttgaagttgaaggtctagcaccttttgttccctttgatcaggccacacttctg
aactcaacgaatgttcttgatcaatggattaactcagccacccaaagccttattcatttt
gtccgacaagaaatggatggttatcgcctttacacagtggttccttaccttctgaagttt
cttgataaccttacaaatatttatgtaaggttcaatcgtaagagacttaaaggtcgttct
ggggaagaagactgcaggatagcactatcaactctttaccatgtgcttttgttatcctgt
aaagtgatggctccttttacacctttcttcactgaggtgctctatcaaaatatgcgaaaa
gtttctaatggatcagaggaaagcatacactattgcagttttcctacagaagaaggaagg
aggggagaacgaattgagcagagtgtttcaaggatgatgacaataattgatctagccaga
aacattcgtgagcgtcacaacaagcctcttaagactccactaagggagatggttatagtt
catcccgatgcagacttccttgatgacataaatggaaaattgaaggagtatgtgctggag
gaactcaatgtacgatcccttgtaccatgtaatgatactttaaaatatgccactttacgc
gccgagcctgaatttagtgttttaggcaaaagacttggaaaatcaatgggcattgttgcc
aaagaaatcaaagcaatgtcacaggaaaacattttggcttttgagaatgctggagaagtc
gtcattgcaaatcaatgtttgaagctgactgatattaaggttctccgtgattttaaacga
cctgatggtatgactgagaaggaggttgatgctgctggagatggtgatgttctagtgata
ttggacttgcgtcctgatgagtcattgtttgaggctggtgctgctcgagagattgttaat
aggattcagaagttacggaagaaagttgctcttgacccaactgacatggtggaggtttac
tttgaatcattagatgatgacaaatcggtctctcagagagttttgcattcacaggaatcc
tacatcagagatgctattggtagtcagttgcttccaaattctctaatgcctgcacatgca
gttgtccttggcgaagagaggttccatgggatagccagcatgtcatttggtatcactttg
acaagacctgcattgatgtttaaccaaaaagccattctttcactgtttacaggtgatgca
aaaagtgcatataagttgcaaacttatctgctatcaagagatcatttgaagttgaagtct
gagtttcaagatggaaatggaaagaaaattgtcgattcaattgaacagctacctgctgtg
gaagtggttcttggtcagcatgtctttttcactgtgggggactattcccttgctggaaaa
tctgactga
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