Glycine soja (wild soybean): 114378027
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Entry
114378027 CDS
T06057
Name
(RefSeq) RING-box protein 1a-like
KO
K03868
E3 ubiquitin-protein ligase RBX1 [EC:
2.3.2.32
]
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03420
Nucleotide excision repair
gsj04120
Ubiquitin mediated proteolysis
gsj04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
114378027
04120 Ubiquitin mediated proteolysis
114378027
09124 Replication and repair
03420 Nucleotide excision repair
114378027
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gsj04121
]
114378027
03400 DNA repair and recombination proteins [BR:
gsj03400
]
114378027
Enzymes [BR:
gsj01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.32 cullin-RING-type E3 NEDD8 transferase
114378027
Ubiquitin system [BR:
gsj04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
114378027
Multi subunit type E3
SCF complex
Ring finger protein
114378027
Cul2 complex
114378027
Cul3 complex
114378027
Cul4 complex
114378027
Cul7 complex
114378027
Cul8 complex
114378027
Cul9 complex
114378027
DNA repair and recombination proteins [BR:
gsj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
114378027
TCR (transcription coupled repair) factors
Cul4-CSA complex
114378027
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-rbx1
zf-ANAPC11
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_11
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
114378027
NCBI-ProteinID:
XP_028192332
LinkDB
All DBs
Position
12:8785643..8788640
Genome browser
AA seq
116 aa
AA seq
DB search
MATLDSDVPMVPAGEPSSSAGPSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDL
CIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
NT seq
351 nt
NT seq
+upstream
nt +downstream
nt
atggcgactcttgattccgacgtgcctatggttcccgccggcgagccctcgagcagcgcc
ggtccttcttccaagaagcccaagcgcttcgagatcaagaagtggaacgccgtcgctctc
tgggcttgggacatcgttgtcgataactgtgctatctgccggaaccacatcatggatctc
tgcatcgagtgccaagccaaccaggctagcgccactagcgaggaatgcactgtggcttgg
ggagtttgtaaccatgcttttcacttccattgcatcagtcgatggctcaagactcgtcaa
gtttgtcctctagataacagtgagtgggagtttcagaaatatggccactag
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