Glycine soja (wild soybean): 114403093
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Entry
114403093 CDS
T06057
Name
(RefSeq) transcription factor PIF3-like
KO
K12126
phytochrome-interacting factor 3
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj04075
Plant hormone signal transduction
gsj04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
114403093
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
114403093
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gsj03000
]
114403093
Transcription factors [BR:
gsj03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
114403093
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GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
114403093
NCBI-ProteinID:
XP_028221626
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Position
20:complement(36485793..36490763)
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AA seq
722 aa
AA seq
DB search
MPLYELYRLAREKLGKETTSTRAPDLCSSPENDFFELVWENGQISSQGQSSRVRRSPSCK
SLPSHCLPSHCPKVRDKDVGYGTNTRMGKFGDLDSGLNEIPMSVPSREVDFCHDEDVLPW
LDYTSMDGSLQHEYGSDFLHASNSFTLLDKKSNGNMAFRDSHKTSEEQGNVFKGSSAEQV
ETARPKASTSQLFPPSLHQCQTSFVSSRSRASDITENNNTSNANQDVSYGEITHILSSSS
DLSSAKVQKCDPPITSNGSSSTIMNFSHFARPAAMVRANLQNIGLKSGLSSARSDSMEIK
NKGAAATSSNPPESILVDSSGECSKEPTMQCQQVVEQSKPDVNSLQPKSVEQNAVPSKQS
EPASKESATKIDQTPNQVLGDSGTKGQTAAEKSMEPAVASSSVCSGTGADQGSDEPNQNL
KRKTKDTDDSECHSEDVEEESAGAKKTAGGQGGAGSKRSRAAEVHNLSERRRRDRINEKM
RALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSMGAGLYMPPMMLPAGMQHMHAPH
MAPFSPMGVGMHMGYGMGYGMGMPDMNGGSSRFPMIQVPQMQGTHIPVAHMSGPTALHGM
ARSNPPGYGLPGQGYPMHMPPASVFPFSGGPLMNSPAQGLHARGSSGLVETVDSASASGL
KDQMQNVDPQVKQSTGGCDSTSQMPTQCEAAAVGFEQSALAHSRGHASKANDNGAVNPDP
GR
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgcctttgtatgagttataccggctggccagagagaagcttggtaaagaaactaccagc
acacgtgcacctgatctatgttcctcgcctgagaatgatttttttgagctagtttgggag
aacggtcagatttcaagccagggtcagtccagtagagttagaaggagcccctcttgcaag
agtttgccatctcactgcttaccatctcactgtcccaaggtcagggataaagatgtagga
tatggtaccaacacaaggatgggaaaatttggggatttagactctggattgaatgaaatt
ccaatgtcggtgccatcccgtgaagtggatttctgtcatgatgaagatgtgttaccttgg
ttggattatacatcaatggatggttccttgcaacatgaatatggttctgatttcctacat
gcctcaaacagttttactctattggataaaaaaagtaatggcaatatggcgtttagggat
tctcataaaacttcggaagaacaagggaatgttttcaagggttcttcagctgaacaggtt
gagactgccagacctaaagctagcaccagtcagttattccccccatcattgcatcagtgt
caaacatcttttgtttcttctagatcaagagcatcggatataactgaaaataacaatacg
agtaatgcaaaccaggatgtgtcttatggtgaaattactcatattctatcttcctcaagt
gatttgtctagtgcaaaggtgcagaagtgtgatccacctattactagcaatggttccagt
tccaccataatgaatttctcccattttgcaaggcctgctgctatggtaagagctaatctt
cagaacattggcctgaagtctggtttgtcttcagcaagatcagatagtatggaaattaag
aataaaggtgctgctgcaactagcagcaatcctcctgaatcaattcttgttgattcaagt
ggtgaatgttcgaaggaaccgaccatgcaatgccagcaggttgtggagcaatccaagcct
gatgtgaactctttgcagccaaaatctgttgaacagaatgctgtgccttctaagcagtca
gagcctgctagtaaagagagtgccacaaagattgatcaaactcccaaccaagttcttggc
gacagtggcactaaaggacagacagctgctgaaaaaagtatggagccagcagtagcctct
tcctctgtttgctctggcactggtgcagaccaaggttcagacgagccaaatcaaaatttg
aagcgaaaaacaaaagacaccgacgactctgagtgccatagtgaagatgttgaggaagaa
tcagctggtgctaaaaagacagctggtgggcaaggaggtgcaggttccaagagaagccgt
gcagctgaagtgcataatctatctgaaaggaggcgaagagacaggatcaatgagaagatg
cgtgcattacaagaactcataccaaattgcaataaggtggataaagcttcaatgctggat
gaggcaattgagtatcttaaaacacttcagctccaagttcaaattatgtcaatgggagct
ggtttatatatgcctccaatgatgttacctgcaggaatgcagcacatgcatgcaccacat
atggctccattttcacctatgggtgttggcatgcatatgggatatggtatgggttatggg
atgggaatgcctgacatgaatggtggatcttcaagattccctatgattcaggtgccccaa
atgcaaggaactcatatccctgttgcgcacatgtctggacctactgctttacatgggatg
gccagatcaaatcctccaggatatgggcttcctggacaaggctatcccatgcatatgccg
ccagcttccgtgtttcctttttcaggaggacctctcatgaattcaccagctcagggacta
catgcccgtggatcatcaggacttgttgaaactgtggattcagcttctgcgtctggctta
aaggatcaaatgcaaaatgttgacccacaagttaagcaaagtactggtggctgtgactcg
acaagtcagatgcctacccagtgtgaagcagcagctgtaggatttgagcaatctgctttg
gctcatagtagaggtcatgcatccaaggctaatgacaatggagctgttaatcctgatcct
ggcagataa
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