Glycine soja (wild soybean): 114403214
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Entry
114403214 CDS
T06057
Name
(RefSeq) 5'-3' exoribonuclease 4-like isoform X1
KO
K20553
5'-3' exoribonuclease 4 [EC:3.1.13.-]
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj04016
MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
114403214
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsj03019
]
114403214
Messenger RNA biogenesis [BR:
gsj03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
114403214
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XRN_M
XRN_N
zf-CCHC
V-ATPase_G
Motif
Other DBs
NCBI-GeneID:
114403214
NCBI-ProteinID:
XP_028221824
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All DBs
Position
20:complement(49354368..49364463)
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AA seq
962 aa
AA seq
DB search
MGVPAFYRWLADRYPLSIADVVEEDPAVGDDGVPFPIDASKPNPNGMEFDNLYLDMNGII
HPCFHPDGKPAPATYDDVFKSIFDYIDHLYTLVRPRKLLYLAIDGVAPRAKMNQQRSRRF
RAAKDAAEAEAEEERLRKEFQSEGKVLSSKDKPETSDSNVITPGTQFMVALSVSLQYYIQ
TRLNHNPSWRNTKVILSDSNAPGEGEHKIMEYIRLQRNLPGFNPNTRHCLYGLDADLIML
SLATHEVHFSILREVVTLPGQQDKCFLCGQAGHFAADCQAEDFDSPDDSPIHKKKYQFLN
IWVLCEYLQFELEIPNPPFEIDFERVVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMH
IYRKEFTAIGGYLTDAGEVFLDRVQRFIQFVTVHEDQIFQKRVRIQLAAENNEEMRARAR
GEMPGEPRASLLDKVKLGEPGYKERYYVEKFGVSNLEEIDKIKKDIVLKYVEGLCWVCRY
YYQGVCSWKWYYPYHYAPFASDFKDLPDLEINFFPGEPFKPFDQLMGTLPASRFLHSLMV
RLIDLENKFLSCSLFNLFISCYSSSALPKKYRDLMSDPSSPIFHFYPADFEIDMNGKRFA
WQGVAKLPFIDEKKLLAATRRIEDTLTEEEQLRNSVMLDLLYVNRAHNLAAHILSYYHVC
SQLPPHERCVQPIDTNASSGGMNGYLWLCERNVFSSVVSSPISGLQDIEYNQVLNITFLN
PRRHDHIPKPPDGVVIPKKVLKAIDIKPFPVLWHEDNIGQRQQARERLQVPGAIAGSQLG
EAAHRLVKNTLNIKSNNTSHGLLEQPPVHHTMNRHRSAGYGKYYGENISGYYGQYNHHGI
TRPKYGGQNDRQNLKIQDRLHNQEQFHNTKSEFVALTMEEGERPRSSRLPNSRPVTNLQP
RFMQNMDPSIPPPKWMTRTPPMNGMHTRHQEAALGPATHDKQTKKVYQVKTRQPDTPEYG
KQ
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atgggagtgccagcgttttaccggtggctcgccgaccggtacccgctctccatcgccgat
gtcgtcgaggaagaccccgccgtcggcgacgacggcgttccgtttccaatcgacgcgtct
aaacctaatcccaacggcatggagttcgacaacttgtacttggacatgaacggcatcatt
cacccttgttttcaccctgacggcaagccggcacctgctacctacgatgatgtgttcaaa
tcaatatttgattacattgaccatctctatacgttggttcgtccaaggaagcttctctac
cttgcaattgatggtgttgcaccaagagccaaaatgaatcagcagcgttctcggcgcttc
cgagctgcaaaggatgcagctgaggctgaagctgaagaggaaaggctgaggaaagaattt
cagagtgagggaaaagttttgtcttctaaagacaagcctgagacttcagactcaaatgtc
attacccctggaactcaatttatggtagcactgtcagtatctctccagtattatatacag
actagattgaaccacaaccctagctggcggaataccaaggttatactgtctgattcaaat
gcacctggtgaaggagaacataaaataatggaatacatccggttacaacgcaaccttcct
ggtttcaatccaaatactcgtcattgtttgtatgggttggatgctgatttgattatgctc
tccttagctacacatgaggttcacttctcaatattgagggaggtagttactttacctggt
caacaggataagtgttttttgtgcggccaagctggccattttgcagctgattgtcaagct
gaggattttgattctcctgatgatagcccaattcacaagaagaaatatcagtttcttaac
atctgggtgctgtgtgaatatttgcaatttgaattggagatacccaaccctccttttgag
attgactttgaacgagtagtggacgattttgtatttctatgcttctttgttggcaatgat
tttcttccgcatatgccaacattagagatcagggagggggctataaatttattgatgcat
atatatagaaaggaatttactgccataggtggttatcttactgatgcgggcgaggttttc
ttagatagagtgcaacgatttatccagtttgttactgttcacgaagatcaaatctttcag
aaacgagttcgcattcagctggctgccgaaaataatgaagagatgagagctagggcaaga
ggagaaatgcctggagaaccacgagcctcgcttttggataaggttaaattaggggagcct
ggatacaaggaaagatattatgttgaaaagtttggtgtatcaaatctcgaggagattgat
aaaattaagaaagatattgtcttgaaatatgtggaaggcctttgttgggtttgccggtat
tattaccagggtgtttgctcatggaaatggtactacccatatcattatgctccatttgct
tctgattttaaagatctacctgatctggaaataaatttcttcccaggagagccatttaaa
ccatttgatcagctcatgggcaccctacctgcttcaaggtttcttcattctcttatggtt
agacttattgatctggaaaataaatttctctcatgctctctgttcaacttatttatttct
tgttacagttcaagtgcactgcctaagaaatatagggatttgatgagtgatccttcatca
cctatttttcacttctaccctgctgattttgagattgatatgaatggaaaacgatttgca
tggcagggtgttgccaagctgccatttattgatgagaagaaattgcttgctgccacaaga
aggattgaagatacattaacggaggaagaacaacttcggaatagtgtgatgcttgatttg
ctatatgtcaatcgtgcacataatttggctgcacatatcttatcatattaccatgtttgt
agtcaattacccccacatgaaagatgtgttcagccaattgacacaaatgctagcagtggc
gggatgaacggatatctttggttatgtgaaagaaatgttttcagctctgttgtatcttct
cccatcagtggattgcaagacattgaatataaccaagtcttaaatattacatttcttaac
cctcgtagacacgatcatatcccaaaacctccagatggtgtagtaatacccaaaaaggta
ttaaaagccattgatattaaaccttttcctgtgctatggcatgaggacaatattggtcaa
agacagcaagcaagagaaaggctacaagtacccggagcaatagctggatctcaactggga
gaagcagctcatcgacttgtcaaaaataccctcaacattaaatcaaataatacctcccat
ggattgctggagcaacctcctgtccatcatacaatgaacaggcatcgatcagctggatat
ggaaaatattacggtgagaatataagtggttattatggacaatataatcaccatggcatc
actagacctaaatatggtggacagaatgacagacagaatttgaagatacaagataggtta
cataatcaagaacagtttcacaatacgaaaagtgagtttgttgcgttaacaatggaggaa
ggagagaggcctaggtcatcgaggcttccaaattccagaccagttaccaatttacaaccc
cggtttatgcagaacatggatccttcaataccacctccaaagtggatgactagaacacca
cctatgaatggcatgcatactaggcatcaagaagctgcattggggccagcaactcatgat
aagcaaaccaagaaggtttaccaagttaaaacacgacagccagatacaccagaatatggg
aagcaatag
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