Glycine soja (wild soybean): 114411646
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Entry
114411646 CDS
T06057
Name
(RefSeq) nuclear pore complex protein GP210
KO
K14314
nuclear pore complex protein Nup210
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
114411646
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsj03019
]
114411646
Messenger RNA biogenesis [BR:
gsj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
114411646
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_GP210_15th
Ig_GP210_16th
RRM_1
Ig_NUP210_1st
Ig_NUP210_7th
Big_2
RRM_7
Ig_NUP210_5th
Ig_NUP210_16th
Ig_NUP210_2nd
Ig_NUP210_3rd
Ig_NUP210_15th
RRM_PARP14_3
Ig_NUP210_9th
Ig_NUP210_4th
SF3a60_bindingd
BRAP2
ProRS-C_2
Motif
Other DBs
NCBI-GeneID:
114411646
NCBI-ProteinID:
XP_028231080
LinkDB
All DBs
Position
5:complement(235777..275603)
Genome browser
AA seq
2276 aa
AA seq
DB search
MNDLIRGKMVNMALLLSFLVTATVLASSSHAASSGPHIADVNILLPPKMTFPVDYRLQGS
DGCFQWSWDHHDILSVEPEYNSSSKCSTSARIRSIAPYSGRKETAVYAADLQTGIVIRCK
VFIDNISRIQIFHNSIKLDLEGLATLRVRAFDSEENVFSSLVGLQFMWSLMPEANGLPCH
LVNVPLKDSPLSDCGGLCGNLDIQIKLEDNGVFSDLFVVKGIEIGHEIVSVHLLEPQLKN
LADEIVLTVAEAMSLDPPSPVFVLVGAVIPYTLKVIRGNVPQVVTLPSAHHQWSVSNASV
AQVDSKTGLAYAWNLGMAAVIVEDTRIAGHVQVSSLNVVLPASLCLYISPLSSSGDPVEG
IKSIALTTRWYVVSGHQYLIQIKVFAHDHDAQEIYITENDDVKVYDNDSGHWKTFWVSND
IAVKHGWRNSKILKAYSPGLEKLTASLSYPGGADDKKEIIKAVQEVMVCDRVKYTLGNES
GIILLPWSPGVYQEVELKAIGGCAKTVSDYKWLSSDLSTVSVSAFGVVQAKKPGKATIKV
LSVYDSLNYDEVLVEVSIPSSMVMLHNFPVETVVGSHLQAAVTMKAANGAFFYRCDAFNS
LIKWKAGSESFVIVNATQELLYLETVPNTQFQSSVDGSPCSWTYVYASNPGQAVIHAIFS
KEDHHYSLGPGVLKASSRIVAYLPLIVRQAGDGNQFGGYWLDLVQAESNKQSHSLEELYL
VPGTSLDIVLVGGPEWWDNGVDFIETVEVLDEGNALAEDGVLVHRVSSNLYGVLCQKLGS
FKLLFRRGNLVGDDHPLPSVAEVWLSVTCNIPSSIVLIADEPVNERRIIKAAAQAERSSG
RLRDTPVIVANGRSIRVSAVGISDSGEAYANSSSLSLRWELGSCEGLAYWDYAFDIVKSN
SWERFLVLQNESGLCTVRATVTDFADSLGDDTFHRFTKTENVLTDAIRLQLVSTLRVDPE
FNLIYFNPNAKVNLSIIGGSCFLEAVTNDSQVVEVIQPPSGLECLQLILSPKGLGTANLT
IYDIGLTPPQRASALVQVADIEWIKIISGAEISLMEGSLQTIDLLAGTNGGNNFHASQFV
YMNLHVHVEDSIIELVDTEDFSSLVGGHVNAPSFKIKGRHLGITTLYVSAIQHLGHVIQS
QAIKVEVYAAPRIHPHDIFLLPGASYVLTMEGGPTLGVHVEYEIDNDKIASIDRYSGRLL
ASSIGNTTIIASVFANGNTVICEARSFLRVGVPSTVTLHVQSEQLGIGRKLPIYPLFPEG
TLSSFYELCKNYQWSIEDEKVLSFKVAETLHEDSIQLTASAGSQVNSYFDDNDLGFINVL
YGRSAGKTNVAVSFSCELSTSGSRTQSRFYSSSLSVTVIPDLPLALGVPITWILPPYYTM
TSPLPSSSESHSQNDSRNRRGTISYSLLRSLEKNEALQKDAIFIDADRIKTTKSNNLACI
QAKDRTTGRTEIASCVKVAEVTQIRIASKEVLLNIINLAVGAELDLPTSFYDALGNPFHE
AYNAVPFYAETNYPDVLCVNKTADGKGNVHIKAIQHGKALVRVAISEDLQKSDYVLIRVG
AHIYPQNPVLHIGSPLNLSIKGLSDTISGQWFTTNGSVISVDTLSGMAKAIGEGSAQVSF
HYGRLRLQTTITVLKGNYIFVNAPKETLTNVPYPSKGYNFSVKFSESLGAPGEKKRILFN
CRVDPLFVGYVKPWLDQDSGNSYCLFFPYSPEHLVHSVPKLEGMRPDVSLSISASLEHEH
VSGSASALFIGGFSIMEMSKNSMQLNLTPGSNKTCITVLGNTDVEIHWHHRDLIMISLIH
KEDFGIRGFARYEVKLLKAKRFKDRIIITLPANGQSVEIDINHEPEETASSSVTINKAFW
ASILGYLLLLILSIAIITRFLDRPERSQQTSSSVTTTPSIAAPTTPDRSTPSSVVNDSSP
RTPQPFVDYVRKTIDETPYYKREGRRRINPQNTKIFIGGLARETTIAQFIKHFGKYGEIT
DSVIMKDRKTGQPRGFGFITYADPSVVDKVIEDPHIINGKQVEIKRTIPRGAVGSKDFRT
KKIFVGGIPSNVTEDEFRDFFTRYGEVKDHQIMRDHSTNRSRGFGFITFDSEEAVDDLLS
MGNKIDFAGSQVEIKKAEPKKPSSAPPSSKRHNDSRSSYSSGGYGDTYDGFGGSFGMGGG
YRSGGRGGAYGGFGSEFGGYGGYAGEMGPYRGDLSLGYAGRYGGNFSRGYDLGGYGGPSE
NYGAYGAGGGSSGGGGAYQSGYDGNLGGGYGGASGGPFYGSSRAGYSAGRYHPYGR
NT seq
6831 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatctgatccgagggaaaatggtgaacatggccttgttactgagttttctggtg
acggcgacggtactggcgtcgtcgtctcacgctgcttctagtggtcctcacattgccgac
gttaacatactcttgccgccgaaaatgaccttccctgtcgattataggctccaaggaagt
gacggttgcttccaatggtcatgggatcatcatgatattctgtctgttgagccagagtat
aattcaagcagcaagtgctcgactagtgcaaggataagatccattgccccttatagtggt
cggaaggaaactgctgtttatgctgcggatttgcagactggaattgtgattcgctgcaaa
gtcttcattgacaacatatcaagaatacagatatttcataattctattaaacttgattta
gaggggcttgccacactacgtgtccgtgcctttgacagtgaagaaaatgtattttcctca
ttagttggcttacagtttatgtggagccttatgcctgaagccaacggattaccttgtcac
cttgttaatgttccgctaaaggattccccccttagtgattgtggaggactgtgtggtaac
ttagatatacaaataaaacttgaagacaatggtgtattttcagatctgtttgtagtaaag
ggaattgagattggtcatgagattgtgtcagtgcatctgctcgagccacagttaaagaat
ttggctgatgagattgttcttactgttgctgaagctatgtcacttgatcctccatcacca
gtctttgtccttgttggtgcagtcattccctacacccttaaagtcatccggggaaatgtt
cctcaagtggtcaccttaccctcagcacatcaccaatggtctgtctcaaatgcttcggtt
gctcaggttgactcaaaaacagggctagcatatgcatggaacttgggaatggcagctgtt
attgttgaagatactaggattgctggccatgtacaagtgtcttcactaaatgtggtccta
ccagcttctttatgtttgtatatatcacctttatctagttctggtgatccagtggaagga
atcaaatctattgctctaacgacccgttggtatgttgtatctggccatcagtatcttatc
cagataaaggtttttgcacatgatcatgatgcgcaagagatttatattacagagaatgac
gatgttaaggtgtatgataatgattctggtcactggaaaacattttgggtttcaaatgat
attgctgtaaaacatggctggcggaattctaaaatcttgaaggcttattcaccaggactt
gaaaaattgacagcttctttgagctatcctggtggggctgatgacaaaaaggagattatc
aaagctgtgcaagaagtcatggtttgtgatcgagtaaagtacaccttgggcaatgaaagt
ggaatcatcttactgccctggtctcctggtgtttatcaggaggtggagttaaaggctata
ggaggttgtgcaaaaacagtgagtgactacaaatggctatcttcggacttgtctactgta
tctgtgtcagcttttggtgttgtccaggcaaaaaaacctggtaaagctactatcaaagtg
ttatctgtatatgattcactaaattatgatgaggtccttgttgaagtctccattccttct
tctatggttatgcttcacaattttcccgtagaaactgttgttggatcgcatcttcaagct
gccgtgacaatgaaagcagcaaatggtgcctttttctatagatgtgatgcctttaattct
ttgataaagtggaaagctggaagtgagtcttttgtaattgtcaatgcaactcaggagttg
ttatacttggaaacagtgccaaatactcaattccagtcatcagttgatggctctccttgt
tcgtggacatatgtatatgcttctaatcctggtcaagctgtgatccacgccatattttct
aaagaagatcaccactacagtcttggtcctggtgtattaaaagcatcttcacgtattgtg
gcatatctaccccttattgtgcgtcaggcaggtgatggaaaccaatttggtggttactgg
cttgatttggttcaagccgaaagtaacaagcagtctcatagcttagaggagttatatctt
gtacctggtacaagtttagacatagtacttgttggtggacctgaatggtgggacaatggt
gttgatttcattgaaactgtagaagttttggatgaagggaatgctctggctgaagatgga
gttctagtgcatcgggtctctagtaatttgtatggagttttatgtcaaaaactgggatcc
tttaaacttcttttcagacgtggaaatttggtcggggatgaccatcctctgccatcagta
gctgaagtttggctgtcagtaacatgcaacattccttcttctattgtacttatagctgat
gaaccagtgaatgaacgaagaattattaaagcagcagctcaagctgaacgtagttcaggt
agacttcgtgatacccctgttattgtggcaaatgggcgctctattcgtgtatctgcagtt
ggtatcagtgattcgggagaggcttatgcaaattcatcttctctcagtttgaggtgggaa
cttggcagttgcgagggactggcatattgggattatgcttttgatatagtgaagtctaac
agttgggagagatttctggtcttgcaaaatgaatcaggattgtgcactgttcgtgctact
gttactgactttgctgatagcttgggagatgatacatttcatcgatttactaaaactgaa
aatgttctgacagatgcaattcggttacagcttgtttctaccctaagagttgatccagag
ttcaacttgatatatttcaatcctaatgcaaaggtaaatttgtcaattattggtgggagc
tgtttcttggaagctgttacaaatgattctcaagttgttgaagttattcaaccaccatcg
ggattagaatgcctacaattgattttgtcccctaaaggattagggacagctaatctgact
atatatgacattgggctaacccctccacaaagagcttctgcgctcgttcaagttgcagat
atagagtggatcaagatcatatcaggagcagagattagcctgatggaaggaagtttgcaa
actattgacttattggctggtactaatggtggaaataattttcatgcttctcagtttgtt
tacatgaatcttcatgtacatgttgaagatagtataattgagctggtggatactgaagac
ttctcaagtcttgttggtggacatgttaatgcaccaagttttaaaataaaggggagacat
cttggaattacaaccctttatgtcagtgctatacaacatttgggacatgtaatacaaagt
caagccattaaggtagaagtttatgcagccccaagaatacaccctcacgatattttccta
ctacctggtgcatcatatgtgcttaccatggaaggaggcccaactctgggtgttcatgtt
gagtatgaaattgacaatgataaaattgcgagtattgatagatattctggacggctctta
gcaagttctattggtaacactacaattattgctagtgtctttgcaaatggtaatactgtg
atttgtgaagcacggagttttttaagggtgggagttccatctactgtcacattgcatgta
cagagtgaacaacttgggattggccgcaaattgccaatttatccgttatttcctgaggga
actttgtcttctttctatgagctatgtaaaaattaccagtggagtattgaagatgaaaag
gtattgagcttcaaggtggcagagaccttgcatgaggatagtatccagttgactgcttca
gcaggaagtcaagttaatagttattttgatgacaatgaccttggttttattaatgtcttg
tatggaagatctgcaggcaagaccaatgttgctgtctctttctcatgtgaactttcaact
tctgggtcaaggacacagtcaaggttttacagttcatctttatcagttacagtgattcct
gatcttcccctggctttgggagtccccataacctggattcttcctccctattatacaatg
acaagccctttgccttcatcatcagaatcccattctcagaatgatagtcggaatcgcaga
ggaaccattagctattctttattgagaagtttggagaaaaatgaagctctgcaaaaagat
gctatattcattgatgcggatagaattaaaacaaccaaaagtaacaatcttgcttgcatt
caagctaaagatcgtacaactggaagaacagagattgcttcttgtgtcaaggttgctgag
gtgactcaaattagaatagccagtaaggaggttctgctcaatataattaaccttgccgtt
ggtgcagaacttgatcttccaacaagcttttatgatgctctaggaaatcctttccatgaa
gcatacaatgcagtacctttttatgctgaaactaactaccctgatgttctctgcgtaaac
aaaacagctgatggaaaaggcaatgtccatatcaaggcaattcagcatggtaaagctctt
gtgcgtgtagcaattagtgaagatctgcaaaaatcagattatgtgctgattagagtgggt
gcccatatatatcctcaaaatccagttcttcacataggaagtcctcttaacctaagcata
aaaggtttgagtgatacaatttctggacagtggtttaccacaaatggaagtgtaatatca
gttgatacattatctgggatggccaaagctattggggaaggttcagcacaagtatctttc
cattacggaagattgagactacaaacaacaattacagtgttgaaaggaaattatattttt
gtgaatgctccaaaagagacgttaactaatgtcccgtacccttcaaaaggatacaacttc
tccgtgaaattcagtgaatcccttggtgcacctggagaaaagaagagaattttattcaat
tgtagagtagatccactatttgtggggtatgtgaagccatggctggatcaggactctggc
aactcatattgcttatttttcccttactcaccagagcatttggtgcactcagtacctaag
ttagaaggcatgaggccagatgtatcactctccatttctgcttcccttgaacacgaacat
gtttctggatctgcttcagcactttttattggaggattttctataatggagatgagcaag
aattcgatgcagctgaatttgacgccaggctctaacaaaacttgcattactgtcttggga
aatactgatgttgaaattcactggcatcaccgagacttgattatgatcagtctcatccat
aaagaagattttggcattcgagggtttgcacggtatgaggtcaaattgcttaaagccaag
agattcaaagatagaatcatcatcactctcccagctaatggccagagtgtggagatagac
atcaaccatgaacccgaggaaacagcatcatccagcgtaaccataaataaggccttctgg
gcaagcatcctggggtatttgctgctgttgattttatcaattgctatcatcacacgtttc
ttggacagaccagagagatctcagcaaacaagttcttcagttactactactccaagcatt
gcagcgcccacaactcctgacagaagcaccccatcatctgttgtaaatgactcctctcct
cgaacacctcaaccatttgtagactatgtaaggaaaacgatcgatgaaactccatattat
aagcgagaagggagaagaaggattaatccacagaacacaaagatatttataggtggttta
gcgagagaaacgaccattgcccaatttatcaagcactttggtaagtatggtgagatcacg
gattcggtcatcatgaaggacaggaaaactgggcagcctcgtggatttgggtttataacg
tatgcggatccctctgtggtcgataaagtcattgaggatcctcatattatcaatggcaaa
caagttgagattaagcggacgataccgaggggagctgttggctctaaggattttaggaca
aagaaaatttttgtaggtggaattccttcaaatgtgactgaagatgaatttagagacttc
tttacacgctatggcgaagttaaagatcaccaaataatgcgggaccactctaccaaccga
tctcgtggctttgggtttatcacatttgactctgaagaagcagttgatgatctgctgtcc
atgggaaacaaaattgactttgctggatctcaggtggaaatcaagaaagctgaaccaaag
aagccaagctcagcacctccatcatccaagcgccataacgactctaggtcttcatatagc
agtggtggatatggagatacttacgatggatttggtggcagctttggaatggggggtggg
tataggtcaggtggtaggggtggtgcttatggtggctttggaagtgaatttggtgggtat
ggaggatatgctggtgagatggggccgtatagaggagatctctccctcgggtatgctggt
cgttatggtggaaactttagcagagggtatgatcttggtgggtatggcggtcctagtgag
aattatggagcatatggtgcaggtgggggttcttctggcggtggtggtgcctaccaaagt
ggctatgatggaaacctaggaggtggatatggaggggctagtggtggccccttctatggg
agcagtagagcaggatacagtgctggtcgatatcatccttatggaagataa
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integrated database retrieval system
