Gimibacter soli: PH603_02650
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Entry
PH603_02650 CDS
T09793
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
gso
Gimibacter soli
Pathway
gso03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gso00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PH603_02650 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gso03400
]
PH603_02650 (nth)
Enzymes [BR:
gso01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
PH603_02650 (nth)
DNA repair and recombination proteins [BR:
gso03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PH603_02650 (nth)
Prokaryotic type
PH603_02650 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
Ogg-HhH
RecR_C
Motif
Other DBs
NCBI-ProteinID:
WCL54658
UniProt:
A0AAF0BHV5
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All DBs
Position
complement(550287..550952)
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AA seq
221 aa
AA seq
DB search
MAAKAKKARLMKPAEITEFFARLEAKNPEPKGELEYVNEFTLLVAVVLSAQATDVGVNKA
TRALFKVADTPEKMLALGLEGLKSHIKTIGLYNAKAENVMLLSRRLVDVYGSEVPRDREA
LESLAGVGRKTANVVLNIAFGEPTCAVDTHIFRVANRTGMAPGKTPLAVEKKLMQAIPAP
FARHAHHWLILHGRYICKARKPDCAACPVIDLCQFNEKTAA
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
gtggcggcgaaagcaaagaaggcgcggctgatgaagcccgccgagatcaccgaatttttc
gcgcggctcgaggcgaaaaaccccgagcccaagggcgagcttgagtatgtgaacgaattc
accctgctggtggcggttgtcctgtcggcgcaggctaccgatgtgggcgtgaacaaggcg
acccgcgcccttttcaaggtggccgatacgcctgaaaagatgctggcgctcggccttgag
ggcctgaaatcacacatcaagaccatcgggctttataacgccaaggccgagaatgtgatg
ctgctctcaaggcggctcgtggatgtttacggctccgaagtcccacgtgaccgcgaagcg
ctggaaagccttgctggcgtcggccgcaagacggcgaatgttgtcctgaacatcgcgttc
ggcgagcccacttgtgcggtggatacccacattttccgcgttgccaaccgtaccggcatg
gcgccgggcaaaacacccctcgccgttgagaaaaagctgatgcaggcgatccctgccccc
ttcgcgcggcacgcccatcactggctgattctgcatggtcgttacatctgcaaggcccga
aaacccgattgcgcagcctgcccggtgatcgatctttgccagtttaacgaaaagacggcg
gcctga
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