KEGG   Gluconobacter sphaericus: IGS75_01030
Entry
IGS75_01030       CDS       T07169                                 
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
gsp  Gluconobacter sphaericus
Pathway
gsp03030  DNA replication
gsp03410  Base excision repair
gsp03420  Nucleotide excision repair
gsp03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:gsp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    IGS75_01030 (ligA)
   03410 Base excision repair
    IGS75_01030 (ligA)
   03420 Nucleotide excision repair
    IGS75_01030 (ligA)
   03430 Mismatch repair
    IGS75_01030 (ligA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:gsp03032]
    IGS75_01030 (ligA)
   03400 DNA repair and recombination proteins [BR:gsp03400]
    IGS75_01030 (ligA)
Enzymes [BR:gsp01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     IGS75_01030 (ligA)
DNA replication proteins [BR:gsp03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     IGS75_01030 (ligA)
DNA repair and recombination proteins [BR:gsp03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     IGS75_01030 (ligA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     IGS75_01030 (ligA)
   MMR (mismatch excision repair)
    DNA ligase
     IGS75_01030 (ligA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      IGS75_01030 (ligA)
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB BRCT HHH_2 DNA_ligase_ZBD PTCB-BRCT Nlig-Ia RNA_ligase Zn_ribbon_ISL3 Zn_ribbon_NUD
Other DBs
NCBI-ProteinID: QQX91262
LinkDB
Position
226852..228903
AA seq 683 aa
MTTTPLSAAERHAALEADLARWDEAYHRRDEPEVSDAVYDAARREILELEEAYPDLRSQD
GASQRVGVAPDSAFGKYRHLVPMLSLDNVFDPEGFDGFVSRAGRFLGLDEDGLQSLQFVA
EPKIDGLSISLTYEHGRFVRGTTRGDGIEGEDVTANLLTLKDIPRELPGEAPERIEIRGE
VFLSKSSFLTLNEQQVARGAKPFANPRNAAAGSLRQLDAEITRSRPLSLFAYAQGYTSSP
VATTHWNYLEKLRSWGFTVNPLSQMIGHARDIPAYVEKLARERSGLDYDIDGIVFKLDDL
SLQDRLGFAGRAPRWAIAWKFPAEQAITRLQEIEIQVGRTGALTPVAHLEPVNVGGVIVS
RATLHNEDEIARKDVRVGDLVRLQRAGDVIPQILGPVPSNAPRSEPFVYPDHCPVCGSLA
ERVHGEAVRRCTGGLTCEAQIVERLIHMVSRNAFDIDGLGERSIREFYDAGYIRRPSDIF
RLRQHEEVLLQRDGWGRLSVDNLFRAIDDRRTIPLSRLIFGLGIRRIGERNAQLLSRHYQ
TFENWRTAMLATRPDSEERASLGAIMGVGDAIADELSAFFSESHNIETLDDLASELTDII
PEEAPSEGHLSGKVIVFTGTLTTMSRPEAKAIAERLGAQVTDSVSKKTSLVVLGEKAGSK
AKKAAELGIDTIDESGWRTLAGL
NT seq 2052 nt   +upstreamnt  +downstreamnt
atgacaaccacccctctttctgccgccgagcgtcacgctgcactcgaagcggacctcgcg
cggtgggacgaggcgtatcacagacgcgacgagccggaagtttccgatgccgtctatgat
gctgcacgtcgtgaaattctggagctggaagaagcatatccagatctccgctcccaagat
ggagccagccagcgcgttggcgtcgcacccgattccgctttcggcaaatatcgccatctt
gtccccatgctatcgctcgacaatgtcttcgatccggaaggcttcgatggctttgtttca
cgtgcaggccgctttctcggcctggacgaggacggccttcagtcgctccagtttgtggcc
gagcccaagattgacggcctctccatcagcctgacctacgagcacggacgtttcgtgcgc
gggacaacacgcggcgacggcatcgaaggtgaagacgtcacggccaacctgctgaccctg
aaagatattccacgcgaactgcccggcgaagcacctgaacggattgaaatccgtggcgaa
gtcttcctttcgaaaagcagcttcctgaccctcaacgaacagcaggtcgcacgcggagca
aagcctttcgccaatcctcgcaatgccgcagccggctcccttcgccagctggatgcggaa
atcactcgcagccgtccgctgtctctcttcgcctatgcgcaggggtacacgtcctcaccg
gttgcaacgacacactggaactatctggaaaaactgcggagctgggggttcacggtcaat
ccgctctcccagatgattggccatgcccgcgatattccggcttatgtcgagaagctggca
cgcgaacgctcggggctggactatgacatcgacggcatcgtcttcaaactggacgatctg
agccttcaggatcgtctcggctttgccggtcgcgctccccgctgggccattgcatggaag
tttccggcagagcaggccattacgcgcctgcaggaaatcgagatccaggtcggccgcaca
ggcgccctgaccccggttgcccatctggaacccgtgaatgtcggcggcgtcatcgtctcg
cgcgcaacactgcacaacgaagacgaaatcgcccgcaaggacgttcgcgtcggggatctg
gtccgcctgcagcgcgccggagacgtgatcccgcaaatcctcggccctgtccccagcaat
gccccccgttcagagcctttcgtctatcccgaccactgccccgtctgcggatcgctcgcc
gagcgcgtgcatggcgaggcggtccgccgctgcacaggcggcctgacctgcgaagcgcag
atcgtggagcgcctgatccacatggtatcacgcaacgcgttcgacatcgacggactgggc
gaacgcagcatccgtgaattctacgacgcgggctacatccgccgccccagcgacattttc
cgcctgcgccagcacgaagaggtcctactccagcgtgacggctggggacggctgtcggta
gacaacctcttccgtgccattgatgaccgccgcaccattcccctgtcccggctgattttc
gggcttggcatccggcggatcggggagcgcaacgcccagcttctgtcccggcattaccag
accttcgaaaactggcgcaccgctatgctggctacacggccggactccgaagaacgcgct
tccctgggcgccatcatgggcgtgggcgatgcgatcgccgatgaactctccgcctttttc
tccgaaagccacaatatcgagaccctcgatgacctggcctcggagctaacggacattatc
cccgaggaagctccgtcggaagggcatctctcaggaaaggtcattgtcttcaccggcacc
ctgaccacaatgagtcgcccggaagccaaagccatcgccgaacgtctgggcgcacaggtg
acggatagcgtgtcgaaaaagacctccctggtcgtgctgggcgaaaaggctggttccaag
gccaagaaagcagcagaactgggaatcgataccatcgatgaaagcggctggcgcacgctg
gcggggctgtaa

DBGET integrated database retrieval system