Gavia stellata (red-throated loon): 104254890
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Entry
104254890 CDS
T08384
Symbol
SETDB1
Name
(RefSeq) LOW QUALITY PROTEIN: histone-lysine N-methyltransferase SETDB1
KO
K11421
[histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase [EC:
2.1.1.366
]
Organism
gste
Gavia stellata (red-throated loon)
Pathway
gste00310
Lysine degradation
gste01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gste00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
104254890 (SETDB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gste03036
]
104254890 (SETDB1)
Enzymes [BR:
gste01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.366 [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase
104254890 (SETDB1)
Chromosome and associated proteins [BR:
gste03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
104254890 (SETDB1)
Heterochromatin formation proteins
Other heterochromatin formation proteins
104254890 (SETDB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF5604
Tudor_4
Tudor_5
SET
MBD
Pre-SET
DUF4537
Motif
Other DBs
NCBI-GeneID:
104254890
NCBI-ProteinID:
XP_009807087
LinkDB
All DBs
Position
Unknown
AA seq
1283 aa
AA seq
DB search
MSGIPGSLAASGAAEMDSQEIKELQQEVMEELGISMEELQDIIDKELEKFECVKQRKQQL
EELEKCVKQKEEEVARVDRLFDDASRAIDKCEILVKDLYSKLGLQYRESSSEDEDLAAKP
TEVIEIPDEDDDDVMSIDSGDSSPRIAKDQTLLREAMAAMRKSAQDVQKFMDAVNKKTNA
QDAQKGESGSDLSNDGDLNVGMRILGKKRTKTWHKGTLIAIQTVGAGKKYKVKFDNKGKS
LLSGNHIAYDYHPSPEKHYVGSRVVAKYKDGNQVWLYAGIVAETPNVKNKDRFLIFFDDG
YASYVKEWELYPICRPLKKTWEDIEDVSCRDFIEEYITAYPNRPMVLLKNGQLIKTEWEG
TWWKSRVEEVDGSLVKILFLDDKRCEWIYRGSTRLEPMFSMKTSTASTQEKKQSGQARTR
PNVGAVRSKGPVVQYTQDLTGAGTQYKPLEQMQAASLAARSISPQPAEMECSDSQLAQSR
KQVAKKSTSFRPGSVGSGQSSPSSPVLSDTPPSGRTGAAQQHRSDLGRLSSGQAGSGTAQ
AFHGMMDRVPNEPSYRAPLEKLFYLPHVCSYTCLSRVRPIRSDQYRSKNPLLIPLLYDFR
RMTARRRVNRKMGFHVLYKTPCGLCLRTMQEIERYLFETDCDFLFLEMFCLDPYVLVDRK
FQPYKPYYYIADITKGREDVPLSCVNEIDNTPPPQVAYSKERIPGKGVYINTSWEFLVGC
DCKDGCRDKSKCACHQLTVQATGCTPGGQINPNSGYQHKRLEECLPTGVYECNKRCKCNI
NMCTNRLVQHGLQVRLQLFKTQNKGWGIRCLDDIAKGSFVCIYAGKILTDDFADKEGLEM
GDEYFANLDHIESVENFKEGYESDAKCSSDSSGVDLKDEEEENTGTEEQEESNEDSSDDN
FCKDEDFSTSSVWRSYATRRQTRGQKENGLSETASKDSGLTRQISHDEVAVAASCKLPVS
EETSKNKVASWLSSNSMSDGFQDNDSASSFKMSEGGEAKPSKTELAGEREKASTSALGDL
DGESKASKKDEPEDPTKIPGLSDLGRMYGYNPSPPKLEGIRRPTSKTALLQSRRHSLAPQ
PTTDDVLTLSSSTDSEGENGQAVAGQAQGTTNDSDDIQTISSGSEEEEGDDKKNPSSGSG
PVKRQVAVKSTRGFALKSTHGIAIKSTNMAAADKGESAPVRRTTRFRTTRQFYDGEESCY
IIDAKLEGNLGRYLNHSCSPNLFVQNVFVDTHDLRFPWVAFFASKXVRAGTELTWDYNYE
VGSVEGKELLCCCGAIECRGRLL
NT seq
3852 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggaatacctgggagcctggcagcctctggtgcagcagaaatggattcccaggag
atcaaagagctgcagcaagaagtgatggaggagctgggaatctccatggaggagctccag
gatattattgacaaagagctggaaaagtttgagtgtgtgaagcagaggaagcagcagctg
gaggagctggagaagtgtgtgaaacagaaggaagaagaggtggctcgcgttgaccggctc
tttgatgacgcttcgagagccattgataaatgtgagatattggtgaaggatttgtactcc
aagctgggcctccagtatcgtgagagcagttctgaggacgaggacttggctgccaagccc
acggaagtgattgagatcccggatgaggacgacgatgatgttatgagtatcgattcaggc
gatagtagtcccagaattgcaaaggatcagactctgctgcgggaagccatggctgcaatg
cggaagtccgcccaggacgttcagaaatttatggatgccgtgaacaagaaaacaaatgcc
caggatgcacaaaaaggtgagtctgggagtgatctcagcaacgacggtgatctgaacgtt
ggcatgaggatcctgggcaagaagagaaccaaaacgtggcacaaaggaactctgattgcg
atccagacggtcggtgctggaaagaagtacaaagtgaagtttgataataaagggaagagt
ttgctttctggcaatcacatcgcttatgactatcacccctcgcctgagaaacactacgtt
ggcagcagggttgtggcaaaatacaaagatgggaatcaggtttggctgtatgctggcatt
gtggctgaaaccccaaatgtgaagaataaagacaggttcctgatcttctttgacgatggc
tacgcttcatatgtcaaggagtgggagctgtacccaatctgcaggccactgaaaaagacc
tgggaagacatagaggatgtttcctgtcgcgatttcattgaggagtacatcacggcctac
cccaaccgccccatggtgctgctgaagaacggccagctgatcaaaacagagtgggaaggg
acctggtggaaatccagagtggaagaagtggatggcagtctggtcaaaatccttttcctg
gatgacaaacgctgtgagtggatttaccggggttccacacgcctcgagcccatgttcagc
atgaaaacttccacagcctccacccaagaaaagaagcaaagtggacaagcaaggactcgt
cccaacgttggtgctgtcaggagcaaagggcctgtagtacaatatacgcaagatttaacg
ggagccggtacccagtacaaacctttagagcaaatgcaggcagcctcgctggctgcacgg
tccatttctccgcagcctgctgagatggaatgctctgacagtcagctggcccagtcgaga
aagcaagtggccaagaaaagcacttccttccgtcctggttccgtgggctctgggcagtcg
tcaccttcttcgcctgtcctaagtgatacacctccgtcgggaaggacgggtgcggcccag
cagcatcgttctgatttggggcggctctccagcggccaggcaggcagcggcacagcacag
gccttccacggcatgatggaccgtgtgcccaacgagccctcttaccgagccccgctggag
aaactcttctacctgccgcacgtctgcagctacacctgcctgtcccgtgttcgtcccatc
cgcagcgatcagtaccgtagcaagaaccccctgctcatcccgctgctctacgacttccga
cggatgacagcccgccgacgggttaaccgcaagatgggcttccatgtcctctacaagacg
ccgtgtgggctgtgcctgcgaaccatgcaggagattgagcgctacctttttgagacggac
tgcgacttccttttcctggagatgttctgcctcgacccatatgtgctggtagatcgcaag
ttccagccctacaaaccctactactacatcgcagacattaccaagggcagggaggacgtg
ccgctgtcctgtgtcaacgagatcgataacaccccgcctccgcaggtggcctacagcaaa
gaacgcatccccggcaaaggggtttacatcaacaccagctgggagttcctcgtgggctgc
gactgcaaagacggctgcagagacaaatcgaaatgtgcctgtcaccagctgacagtccaa
gcgactggctgcaccccaggtgggcagatcaaccctaattcaggctaccagcacaaaagg
ctggaagaatgcctcccgacaggagtttatgagtgtaacaagaggtgcaagtgcaacatt
aacatgtgcaccaatcgcttggtccaacacgggctccaggtccgactgcagttattcaag
acgcagaacaaaggctggggcattcgctgccttgatgatattgctaaaggctcttttgtc
tgcatctacgcagggaaaatcctcacggatgactttgccgacaaagaggggttagagatg
ggtgacgagtattttgcaaacctggatcacattgagagcgtggagaacttcaaggagggc
tacgagagcgacgcaaaatgctcttcggacagcagcggcgtggacctcaaggatgaagag
gaggaaaacacaggcactgaggagcaggaggagtccaacgaggacagctctgacgacaac
ttctgcaaggacgaggacttcagcacgagctcagtatggcgcagctatgccacgcgacgg
cagacccggggccagaaggagaacgggctgtcggagacagcctccaaggactcagggctc
acccggcaaatcagccacgatgaggtggcggtggctgcctcctgtaagctgccagtgtcg
gaagagacctccaagaacaaagtggcctcgtggctgagctccaacagcatgtctgacggc
ttccaggacaatgacagcgcctcctccttcaagatgagcgaaggtggcgaggccaagccc
agcaaaacggagctcgctggtgagagagagaaagcctccacttctgccctgggcgacctg
gacggagagtcaaaggcatcgaagaaagatgaacctgaagatccaaccaaaattcccggg
ctaagcgacttgggaaggatgtacggctacaacccgagccctcccaaactggaggggatc
cggaggccgacgagcaagaccgccctgctgcagagcagacggcattctctcgccccgcag
cccaccacggatgacgtgctgaccctgtcgagcagcacggacagcgagggggagaacggg
caggcggtggcaggacaggcccagggcaccaccaacgacagcgacgacatccagaccatt
tcctcgggctctgaggaggaggaaggggacgacaagaaaaacccctcgtctgggtcaggt
cctgttaagaggcaggtggcagtgaaatccacccgaggctttgccctgaaatccactcac
gggatcgccatcaagtcaaccaacatggcagcagccgacaagggcgagagcgcgcccgtc
cgcagaaccacccgttttagaaccacccgccagttctacgatggagaggagtcctgttat
atcatcgacgccaagctggaagggaacctgggccggtacctcaaccatagctgcagtccc
aacctcttcgtgcagaacgtttttgtggacacgcacgacctccgcttcccctgggtcgcc
ttcttcgccagcaagtgagtcagagccggcacagagctgacgtgggattacaactacgaa
gtgggtagcgtggaaggcaaagagctgctgtgctgctgcggggctatcgagtgccgaggg
cggctgctgtga
DBGET
integrated database retrieval system
