Gavia stellata (red-throated loon): 104258978 Help Entry 104258978         CDS       T08384                                  Symbol THBS1 Name (RefSeq) thrombospondin-1   KO K16857   thrombospondin 1 Organism gste  Gavia stellata (red-throated loon) Pathway gste04115   p53 signaling pathway gste04145   Phagosome gste04148   Efferocytosis gste04350   TGF-beta signaling pathway gste04510   Focal adhesion gste04512   ECM-receptor interaction gste04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:gste00001]  09130 Environmental Information Processing   09132 Signal transduction    04350 TGF-beta signaling pathway     104258978 (THBS1)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     104258978 (THBS1)  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     104258978 (THBS1)    04148 Efferocytosis     104258978 (THBS1)   09143 Cell growth and death    04115 p53 signaling pathway     104258978 (THBS1)   09144 Cellular community - eukaryotes    04510 Focal adhesion     104258978 (THBS1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     104258978 (THBS1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:gste04131]     104258978 (THBS1)   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:gste00536]     104258978 (THBS1) Membrane trafficking [BR:gste04131]  Endocytosis   Phagocytosis    Opsonins     104258978 (THBS1) Glycosaminoglycan binding proteins [BR:gste00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    104258978 (THBS1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC TSP1_CFP_C cEGF EGF_3 TSP1_ADAMTS Laminin_G_3 TSP1_CCN EGF Laminin_G_2 Motif Other DBs NCBI-GeneID:  104258978 NCBI-ProteinID:  XP_009812537 LinkDB All DBs Position Unknown AA seq 1176 aa AA seqDB search MGPATVLFLLLMLGVSEAKRTAESRSDDNSVFDLFELIGFIRKGAGRRAPGVHLVKGPES SSPAYRIEDASRIPAVPDSKFQDLLDAIHAEKGFILLATLRQAKKSRGTLLSVEQKDGSG HVFSLVSNGKAGTLDLSLSGDGKQQLVSVEDALLATGHWKNITLFVQEDRAQLYVGCEKM ENAELDIPIQNIFTRDLASSARLRIAKGGVNDNFQGLLQNVRFVFGTTLETILRNKGCSS STSAIITLDNPINGSSPAIRTNYIGHKTKDIQAVCGFSCDELTNMFVELQGLRSMVTTLQ DRVRKVTEENELIAKVVQITPGVCIHNGILHKNKEEWTIDSCTECTCQNSATICRKVSCP LMPCSNATVPDGECCPRCWPSDYADDGWSPWSEWTSCSVTCGNGIQQRGRSCDSLNNRCE GSSVQTRTCHLQECDKRFKQDGGWSHWSPWSSCSVTCGAGIITRIRLCNSPVPQLNGKPC EGEARENKSCQKDPCPINGNWGPWSPWDACTVTCGGGLQKRSRLCNNPEPQYGGKTCIGE ARGTQVCNKQDCPVDGCLSNPCFAGTTCTSSADGSWKCGACPAGYHGDGVHCQDIDECKE VPDACFVFNGVHRCENTEPGYNCLPCPPRFTGTQPFGRNIEDAMANKQVCKPRNPCTDGT HDCNKNAKCNYLGHFSDPMYRCECKPGYAGNGIICGEDTDLDGWPNENLVCVANATYHCK KDNCPNLPNSGQEDYDKDGIGDACDNDDDDDGIPDDRDNCPFIYNPQQYDYDRDDVGDRC DNCPYNHNPDQTDTDNNGEGDACAVDIDGDGVLNERDNCQYVYNVDQRDTDLDGVGDQCD NCPLEHNPDQEDTDSDRIGDQCDNNQDIDEDGHQNNLDNCPYVPNANQADHDKDGKGDAC DHDDDNDGIPDDKDNCRLVANPDQADSDGDGRGDACKDDFDQDSVPDIDDICPENVDISE TDFRRFQMIPLDPKGTSQNDPNWVVRHQGKELVQTVNCDPGLAVGFDEFNAVDFSGTFFI NTERDDDYAGFVFGYQSSSRFYVVMWKQITQSYWDSTPTKAQGYSGLSIKVVNSTTGPGE HLRNALWHTGNTPGQVRTLWHDPRHIGWKDFTAYRWRLSHRPKTGYIRVVMYEGKKIMAD SGPIYDKTYAGGRLGLFVFSQEMVFFSDLKYECRDP NT seq 3531 nt NT seq  +upstreamnt  +downstreamnt atggggccagcgactgttctcttcctcctcctcatgctcggcgtctcagaggccaagcgc actgcagagtccaggagtgatgataacagcgtcttcgatctctttgaactcattggcttc attaggaagggagctgggcgccgggcacccggggtgcacctggtgaaggggccagaatcc tccagccctgcttaccgcattgaagatgccagtcgcatccctgctgtccctgactccaag ttccaagacttactagatgccatccatgctgagaagggcttcatcctcctggccactctc cggcaagccaagaagagcagaggcacgctgctgtctgtggaacagaaagatggctctggt catgtcttcagcctagtatcaaatggcaaggcaggcaccctggacctgagcctttctggc gatggcaagcagcaattggtgtcagtagaggatgctttgctagctacaggacactggaag aatatcaccctgtttgtgcaggaggaccgggctcagctctatgtggggtgtgagaaaatg gagaatgcagaactagacatccccatccagaacatcttcactagggacctggccagcagt gccaggctccgtattgccaaagggggagtcaatgacaacttccagggactgctgcagaat gtgcggtttgtgtttggaacaactctggaaactatcctgaggaacaaaggctgctccagc tccactagtgcgatcattactttggacaacccgatcaatggttccagcccagctatccgc actaattacattggccataaaacaaaggacatccaagcagtctgtggattttcctgtgat gaactaacaaatatgtttgtggaactgcaagggctccgatccatggttacaacacttcaa gacagagttcgcaaagtgactgaagaaaatgaactcattgccaaagtcgtccagatcact cctggagtatgcattcataatggaatcttgcacaaaaataaagaagagtggactattgac agctgcactgaatgtacctgccagaactctgcaactatatgccggaaggtgtcctgtcct cttatgccttgttccaatgccactgttcctgatggggagtgctgcccccgatgctggcct agcgactatgcagatgatggatggtctccttggtctgaatggacttcatgctctgtgacc tgtgggaatgggattcagcagagagggcgatcctgtgacagtctcaataaccgctgtgaa gggtcttctgtacagactcggacttgccaccttcaggaatgcgataagagatttaaacag gatggtggctggagtcactggtcaccatggtcatcatgttctgtcacttgtggcgcgggc atcatcactagaattcgtctctgcaactctccagtaccacagctgaatggcaaaccttgt gagggtgaggcaagagaaaacaaatcctgccagaaagatccttgcccaattaatggcaac tggggaccatggtctccatgggatgcttgcacagtgacatgtggaggaggacttcaaaaa cgtagccgtctctgcaataatcctgagcctcagtatggtgggaagacttgcataggtgaa gctagagggactcaggtctgcaacaaacaggactgtccagttgatgggtgtctgtctaat ccctgctttgcgggaactacatgtaccagctcagctgatggttcctggaagtgtggtgcc tgccctgctggctaccatggtgatggtgtccactgccaagatattgatgagtgcaaagag gttcctgatgcctgctttgtcttcaatggagtgcacaggtgtgagaatactgaaccgggg tacaactgtctgccttgtccaccacgtttcactgggacacagccatttggtcgcaatatt gaggatgccatggctaacaaacaggtctgcaagccacgtaatccatgcacagatggaaca catgactgcaacaagaatgccaaatgcaactaccttggccacttcagtgaccccatgtat cgctgtgaatgtaaaccaggctacgctggcaatggcataatctgtggggaagatactgac ttggacggatggccaaatgagaaccttgtttgtgttgccaatgccacttaccactgtaaa aaagataactgccctaatctgcccaactctgggcaggaagactatgataaggatgggatt ggtgatgcctgtgataatgatgatgatgatgacggtattcctgatgaccgggacaactgt ccgttcatctacaacccacagcagtatgactatgatagggatgatgttggcgaccgctgt gataactgcccctacaatcacaaccctgatcaaactgacactgacaacaatggagaagga gatgcatgtgcagtggatattgatggagatggggtccttaatgaaagagacaactgccaa tatgtctacaatgtagaccagagggatacagacttggatggtgttggagatcagtgtgat aactgtccactggaacacaaccctgaccaggaagacactgattctgaccgcataggtgat cagtgcgacaacaaccaggacatagatgaagatggccatcaaaataatcttgataactgc ccctatgtgcccaatgccaatcaagctgaccatgacaaggatggaaaaggtgatgcctgt gaccatgatgatgacaatgatggcatccctgatgacaaagataactgcagattggttgcc aaccccgatcaagctgattctgatggtgatggacgtggagatgcttgcaaagatgacttt gaccaagacagtgtgccagacattgatgatatctgtcctgaaaatgtggacattagtgag actgatttccgaagatttcagatgattcccctggatcccaaagggacatcccaaaatgat ccaaactgggttgttcgtcaccagggtaaagaactggttcagacagtcaactgtgaccct ggccttgcagttggttttgacgaattcaatgctgtggacttcagtggcaccttcttcatc aatacagaaagggatgatgattatgctggctttgtatttggctaccaatctagcagtcgt ttctatgttgtcatgtggaagcagatcacccagtcttactgggactcaacaccaaccaaa gctcaaggctactcaggtctctccatcaaagttgtgaattccaccactggtccaggagaa caccttcgtaatgctctgtggcacacaggaaacactcctggccaggtgagaactttgtgg catgaccctcgtcacataggctggaaagacttcactgcatacagatggcgtcttagccat agaccaaagactggttacatcagggttgtaatgtatgaagggaagaaaatcatggcagac tcaggaccaatctatgataaaacctatgctggtggtcggctaggattatttgtcttctct caagaaatggtgttcttctcagatcttaaatatgaatgcagagatccataa

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