Gavia stellata (red-throated loon): 104260654
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Entry
104260654 CDS
T08384
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin gamma-C3-like
KO
K16497
protocadherin gamma subfamily C
Organism
gste
Gavia stellata (red-throated loon)
Brite
KEGG Orthology (KO) [BR:
gste00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gste04515
]
104260654
Cell adhesion molecules [BR:
gste04515
]
Cadherins
Protocadherins
104260654
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_C_2
Cadherin_2
Cadherin_FAT4_N
Cadherin_CELSR2_9th
RET_CLD1
Motif
Other DBs
NCBI-GeneID:
104260654
NCBI-ProteinID:
XP_009814743
LinkDB
All DBs
Position
Unknown
AA seq
726 aa
AA seq
DB search
SGALLVSERIDREELCGTLSPCSLSFEIVVENPLELYSGAVEIQDINDNDPVFPSSQARL
EISESVAAGARFPLESAQDPDVGINSLQTYQLSANPHFALDVQTRVDGSKYAELVLEKEL
DREEQRELHLVLTALDEAAPGGSPPRSAHVQIHIDVVDANDNAPVFNQSTYKASVRENTP
SGTLVARIRAYDLDDGPNGDIVYSFSSHTPAKVRELFALDSATGELRVKGQLDYEETKLY
EIYLQAKDKGAVPGVAHCKVLVEVVDVNDNAPEVTVTSVYSPVPEDAAPGTVVALLSVTD
LDSHDNGLVNCFISPGIPFMLSSSLKNYYTLKTKTVLDREKASEYNITITARDSGSPPLS
AVKQILVQVSDVNDNAPKSSQDSYDVYVLENNMPGIPILNVSATDPDLGRNAHLSYTLLQ
GDPTVGHLFSINQENGTLYLLTSLDHEDQVEFSMTVQVQDGGSPPLATKLSVSVFVIDLN
DNAPTVLYPHPNTTTTYTDVVAPGTPAGHIVTKVVAVDADAGYNAWISYTLLQATDPSLF
SVGLHSGEIFTARQLREDDAPQHNHGEPVLSASATVSISVAEMVKEVLTDLTDVAPANDP
RRHVTFYLILAVILVSAAFFITMLSVGIFKCYKWRQSKELFNSSRSTLYRTPGPFQHIDA
VRGGFTPPNFYHQVYLTTDSRQSDLLCKKPFTSSPLGSHQSTMRNGEPGLYHQIVGTASR
LPVPAE
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
agcggcgcgctgctggtgagcgagcggatagaccgggaggagctctgcggcacgctctct
ccctgctcgctcagctttgagatcgtggtggaaaacccgctggagctgtacagcggcgcc
gtggagatccaagacatcaatgacaacgacccggtttttcccagcagccaggcgaggctg
gaaatcagtgagtcggtggcggccggagcgcgcttcccgctagagagcgcgcaagacccc
gatgtggggattaactctttgcagacctaccagctcagcgccaacccgcactttgcgctc
gacgtgcagacgagggtggatggcagcaagtacgcggagctggtgctagagaaggagctg
gacagggaggagcaacgggagcttcacttggtcttgactgcactggatgaggcagccccc
ggaggcagcccgccacggtcggcccacgtgcagatccacattgacgttgtggatgccaat
gataatgccccggtcttcaaccagtccacctacaaggcaagcgtgagggagaacacgccc
agcggtaccctggtcgccaggatccgtgcgtacgatctggatgatgggcccaacggagac
atcgtctattccttcagcagccacacgcctgccaaggtacgagaactctttgctctggac
tcggccacaggggagttgagggtcaaggggcagctggactacgaggaaacgaagctgtat
gagatttacttacaggctaaagacaagggtgccgttcctggcgtggctcattgcaaagtg
ctggtggaagtcgtggatgtgaacgacaatgctccagaggtgacagtgacttctgtgtac
agccctgtgcctgaagatgcagccccagggacggttgtagctctgctgagtgtaacggac
ttggactcccatgacaacggtctggtgaactgcttcatttcccctgggatcccgttcatg
ctcagctcctccctcaaaaattactacacattgaaaacaaaaacagttctggaccgggaa
aaggcatcagagtataacatcactatcaccgccagggactcaggctcaccacccttgtct
gcagtaaaacagatcctggttcaggtgtcagatgtcaacgacaacgcgcccaagtcttcc
caggactcctatgatgtgtatgttcttgagaacaacatgcctggcatccccatcctgaac
gtgagcgccacagacccagaccttgggcgcaacgcccatctctcctataccctcttgcag
ggtgaccccactgtaggccacctcttctccatcaaccaggagaatggcaccctctacctg
ctcacctccctggaccacgaggaccaggtggagttcagcatgacggtgcaggtccaggat
ggcggctctccgcctctggccactaaactttcagtcagtgtgtttgtcattgacctcaat
gacaatgccccaaccgtgctgtaccctcatcccaacaccaccaccacctataccgatgtg
gtggcaccaggcactcctgccgggcacatagtcaccaaggtggtggcggtggatgcggat
gcagggtacaatgcctggatctcctataccctgttgcaggccactgaccccagcctcttc
tcagttgggctgcacagtggggagatcttcacggcccgccagctccgggaggatgacgct
ccccagcacaaccatggggagcctgtgctgtctgccagtgccactgtctccatctctgtg
gctgagatggtcaaggaggtgctcactgacctcactgatgtggcacctgccaatgatccc
agaaggcatgtgactttctatctcatcctggctgtgattttggtgtcagcagctttcttc
atcaccatgttgtcagtgggcatcttcaagtgctacaagtggaggcagtcaaaggagctg
ttcaacagctccaggagcaccctgtacaggacaccagggcccttccagcacattgacgct
gtgcggggcggcttcacgccacccaacttctaccaccaggtctatctcaccacggactct
cgccagagtgatctcctgtgtaaaaagcccttcacttccagccccctggggagccaccag
agcaccatgaggaatggtgagccagggctgtaccaccagatcgtgggcactgccagcagg
ctccctgtgcctgccgag
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