Gavia stellata (red-throated loon): 104263869
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Entry
104263869 CDS
T08384
Symbol
PTPRF
Name
(RefSeq) receptor-type tyrosine-protein phosphatase F
KO
K05695
receptor-type tyrosine-protein phosphatase F [EC:
3.1.3.48
]
Organism
gste
Gavia stellata (red-throated loon)
Pathway
gste04514
Cell adhesion molecule (CAM) interaction
gste04517
IgSF CAM signaling
gste04520
Adherens junction
gste04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
gste00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
104263869 (PTPRF)
04517 IgSF CAM signaling
104263869 (PTPRF)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
104263869 (PTPRF)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
104263869 (PTPRF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gste01009
]
104263869 (PTPRF)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gste04515
]
104263869 (PTPRF)
Enzymes [BR:
gste01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
104263869 (PTPRF)
Protein phosphatases and associated proteins [BR:
gste01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
104263869 (PTPRF)
Cell adhesion molecules [BR:
gste04515
]
Immunoglobulin superfamily
Type II RPTP family
104263869 (PTPRF)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Y_phosphatase
fn3
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
I-set
Ig_3
Fn3_VIN3
Fn3_ROS1
Fn3_PBP1
Ig_2
fn3_2
Interfer-bind
PTP-SAK
Tc-R-P
ig
DSPc
Ig_VEGFR-1-like_5th
Y_phosphatase3
fn3_SORL1
PTPlike_phytase
PTP-NADK
V-set
Ig_C17orf99
Fn3_PTPRU
YxzE
DUF3377
Insulin_TMD
ICAM_N
VEGFR1-3_N_Ig-like
TMEM154
Motif
Other DBs
NCBI-GeneID:
104263869
NCBI-ProteinID:
XP_009819021
LinkDB
All DBs
Position
Unknown
AA seq
1790 aa
AA seq
DB search
DHLPAGFPTIDMGPQLKVVEKARTATMLCAASGNPDPEISWFKDFLPVDTATSNGRIKQL
RSGGTPIRGALQIENSEESDQGKYECVATNSAGTRYSAPANLYVRDQREVRRVAPRFSIP
PSNHEVMPGGSVNLTCVAVGAPMPYVKWMAGVEELTKEDEMPVGRNVLELNNIMQSANYT
CVAISSLGMIEATAQITVKALPKPPTEPLVTETTATSVTLTWDSGNSDPISYYVIQYKPK
SLEGQFQEVDGVATTRYSIGGLSPFSEYEFRVIAVNNIGRGPPSELVEARTGEQAPSSPP
LKVQARMLSASTMLVQWEQPEEPNGQIRGYRVYYTTDPHLPLSMWQKHNTDDSHLTTVGS
LITGTTYSIRVLAFTSVGDGPPSDIIQVKTQQGVPAQPADFQAEAESDTRILLTWLPASQ
ERITKYELLYWEGEDGTQQKVEFDPTSSYAVEGLKPDTLYKFRLGARSELGVGVYSPTIE
ARTAQSTPSAPPQEVECVSTSSTTIRVSWVPPPAQSRNGVITQYSIAYQAVEGDDNTKHV
VDGIGREHSSWEIKDLEKWTEYKVWVRAHTDVGPGPESIPVHVRTDEDVPSAPPRKVEVE
SVNSTAIRVSWKLPISNKQHGQIRGYQVTYVKLENNEPRGQPVIKDVMLSEAQWRAEDSV
DHETVIGGLLPETTYSVTVAAYTTKGDGARSKPKVITTTGAVPGKPTMMISTTAMNTALI
QWHPPKEMVGELLGYRLQYRRLDEEKMNTIDFGKRDHHYTVTNLHKGATYLFKLSAKNRA
GPGEEFEKEITTAEDVPSGFPQNLRVVGLTTSTTEVAWDPPVLAERNGKIVNYTVVYRDI
NSQQDLLNITKDTSITLTNLKPDTTYDIKVRARTNKGVGPLSPSIQSRTMPVEQVFAKNF
RVNAVMKTSVLLSWEVPDSYKSAVPFKILYNSQSVEVDGHSMKKLISDLQPDTDYSFVLM
NRGSSAGGLQHLVSIRTAPDVLQSKPIATNKYIQEGKFTLTLPKVQTTVPVRWYYIVVVP
ADQSTSSPTARWRTPDEMELDQLLEAISQGSQSRRQRRQADRLKPYIAAQVDVLPETFTL
GDEKNYKGFYNKPLSQDLSYRCFVLASLEDGDTKRYAASPYSDEIVMEVASAKQQDEPEM
LWVMGPVLAVILIIIIVIAILLFKSKQERKRAHSPSSKDEHSIGLKDSLLAHSSDPVEMR
RLNYQTPGMRDHPPIPVTDLADNIDRLKANDGLKFSQEYESIDPGQQFTWENSNLEVNKP
KNRYANVIAYDHSRVILTSIDGVPGSDYINANYIDGYRKQNAYIATQGPLPETLSDFWRM
VWEQRTATIVMMTRLEEKSRVKCDQYWPSRGTETYGMIQVSLLDTVELATYTVRTFALYK
NGSSEKRELRQFQFMAWPDHGVPEYPTPILAFLRRVKACNPPDAGPMVVHCSAGVGRTGC
FIVIDAMLERMKHEKTVDIYGHVTCMRSQRNYMVQTEDQYIFIHEALLEAATCGNTEVPA
RNLFAHIQKLTQVPPGESVTAMELEFKLLANSKAHTSRFISANLPCNKFKNRLVNIMPYE
LTRVCLQPIRGVEGSDYINASFIDGYRQQKAYIATQGPLAETTEDFWRMLWEHNSTIVVM
LTKLREMGREKCHQYWPAERSARYQYFVVDPMAEYNMPQYILREFKVTDARDGQSRTIRQ
FQFTDWPEQGVPKTGEGFIDFIGQVHKTKEQFGQDGPITVHCSAGVGRTGVFITLSIVLE
RMRYEGVVDMFQTVKTLRTQRPAMVQTEDQYQLCYRAALEYLGSFDHYAT
NT seq
5375 nt
NT seq
+upstream
nt +downstream
nt
aagaccacctcccagctggcttcccaaccattgacatgggcccgcagctgaaggtggtgg
aaaaggcccgcacagcaacaatgctctgtgctgctagcggtaaccctgatcctgaaatct
cctggttcaaagacttcctgcctgtcgacactgcaactagcaatgggcgaatcaagcagc
tccgctcgggtggtacaccgatcagaggagctctgcaaatagagaacagcgaggagtcag
accaaggcaaatacgaatgtgttgcaacgaacagtgcaggaacccgctactctgccccag
ctaacctttacgttcgagatcagcgagaagtgcggcgtgttgctcctcgattctctatcc
ctccgagcaaccatgaggtgatgcctggggggagcgtgaacctcacgtgcgtggcagtag
gtgctccaatgccctacgtgaagtggatggctggtgtggaggagctgaccaaagaggatg
agatgcccgtcggcaggaatgtcctggagctgaataacatcatgcagtctgccaactaca
cctgcgtggccatctcctccctcggcatgatcgaagccacagcccagatcactgtcaaag
cactgccaaaacctccaacagagccattagtgactgaaacgacagctaccagcgtgaccc
tcacctgggattcgggcaactccgaccccatttcatattatgtcatccagtacaagccca
aatccttggagggtcagttccaggaggtggatggtgtggcaacaacccgctatagcatag
gtggccttagccccttctcggagtatgagttccgggtcatcgcagtcaataacattggca
ggggtcctcccagtgagctggtcgaggcccggacaggagagcaagctccttcaagtccac
ccctcaaagtccaggcacgaatgctgagtgccagcaccatgctggtccagtgggagcagc
cggaggagccaaacggacagatccgagggtaccgcgtttactataccaccgacccacatc
tgcctttgagcatgtggcagaaacacaacactgatgacagccacctcaccaccgtgggga
gcctcatcacagggaccacatacagcatccgcgtcctggcctttacttcggtgggcgatg
ggcccccgtcggacatcatccaggtcaaaacacagcaaggggttcccgcccagccagctg
acttccaggcagaagcagagtctgatacccgcatcctgttgacgtggctgcccgcctctc
aggaacgcattaccaaatacgagctgctgtactgggaaggggaggatggcactcagcaaa
aggtggagtttgacccaacctcctcgtacgctgtggaaggtctcaaaccagacacgctgt
acaagtttcgtctgggtgcccgctcagagctgggggtaggagtctacagccccacgatcg
aagccagaactgcccaatccaccccctctgccccaccccaagaagtcgagtgtgtaagca
ccagctccactaccatccgggtaagttgggtgccaccgcctgcccagagccgcaatgggg
tcatcacccagtactccattgcgtaccaggcagtggaaggagatgacaacaccaagcatg
tggtggatggcattggacgggagcactccagctgggagatcaaggacctggagaaatgga
ccgagtacaaggtgtgggtaagggctcacaccgatgtggggccaggaccggagagcatcc
ctgtgcacgtacgcactgatgaggatgtgcccagtgccccaccgcgaaaggtggaggtag
agtctgtgaattcgactgccatccgagtgagctggaagctgcccatctccaacaagcagc
acgggcagatccgcgggtaccaggttacatacgtgaagctggaaaacaacgagccccgag
ggcagccagtgatcaaggatgtcatgctgtcggaagcacagtggagagctgaggactccg
tcgaccatgagacggtcattggaggcctgctgccagaaaccacctactccgtcacagtcg
ctgcctacaccaccaagggggatggtgcccgcagcaagccaaaagtcatcaccaccacag
gggcagtcccggggaagcccaccatgatgattagcacgacagccatgaacacagccctca
tccagtggcacccacccaaggagatggtaggggagctgctgggttaccggctgcagtaca
gacgtcttgatgaggaaaagatgaacacgatagactttgggaagagagaccatcactaca
ctgtgaccaacctgcacaagggggccacgtacctcttcaaattgtctgccaagaacagag
ctggcccaggagaggagtttgagaaggagatcactactgcagaagatgtgccaagcggct
tcccacagaacctgcgcgtggtgggtctcaccacttccaccacagaagttgcatgggacc
ccccggtcttggcagaaagaaacggcaagatcgtcaactacacagtggtatacagggaca
taaatagccagcaggacctgcttaacatcaccaaggacacaagtatcactttgacgaatt
tgaagcctgataccacttacgacatcaaagtgagggcccgcaccaataagggggttgggc
cactcagccccagcatccagtcccggaccatgcctgttgagcaagtgtttgctaagaact
tccgcgtcaatgccgtcatgaaaacatctgtgttgctgagctgggaagtgcctgactcct
ataaatctgcagtgccttttaagattctgtacaatagccagagtgtggaggtggatggcc
actcaatgaagaaactcataagtgacctccagccagacacggactattcttttgtgctaa
tgaaccgtgggagcagtgctgggggtctccagcatctcgtctcaatccgcaccgctcctg
acgtcttgcaaagcaaacccattgccacaaacaagtacatacaggaaggaaaattcacgc
tcaccctccccaaagtccagaccactgtgccggttaggtggtactacatcgtggttgtgc
cagcggatcagagcaccagcagcccgactgctcggtggcggacacctgatgagatggagc
tggaccagctgctggaggccataagccaagggagtcagagcaggcgccagcgacgccaag
cagacagactcaagccctacattgctgctcaagtggatgtgctgcccgagaccttcaccc
tgggggacgagaagaactacaaaggtttctacaacaagcccctgtctcaagatctcagct
atcgctgcttcgtgctggcctcactggaggatggcgacacgaagagatatgcagccagcc
cctactcagatgagatcgtgatggaagtggcttcagcaaagcagcaggatgaaccggaga
tgctgtgggtgatgggacctgtcctggctgtgatattaatcatcatcattgtcattgcta
tactcctcttcaaaagtaaacaagaaaggaaaagggcacactccccctcttccaaggatg
agcactccatcggcctgaaggactcgcttttggcccactcctctgacccggttgagatga
ggcggctcaactaccagactccaggcatgcgtgaccacccccccatccccgtgacagatc
tcgccgacaacattgacaggctgaaagccaacgatgggctgaagttctcccaggagtatg
agtccattgatccagggcagcagttcacatgggagaactccaacctggaagtgaataaac
cgaaaaaccgctatgcaaacgtgatcgcctatgaccactcacgtgtcatcctgacctcca
tcgatggggtcccaggcagcgattacatcaatgccaattacattgatgggtatcggaagc
agaacgcctacatcgccacgcagggacctctgccagaaaccctcagcgacttctggagga
tggtgtgggaacagagaacagcaactatagtcatgatgaccaggctggaggagaagtcca
gggtaaagtgtgaccagtactggccgagccggggtacggaaacctatgggatgatccagg
tgtccttgctggacacagtcgagctggcaacctacaccgtccgcacctttgcactgtaca
agaatggctccagtgagaagcgagagcttcgacagttccagttcatggcttggcccgatc
acggggtaccagaataccccaccccaatcctagcttttctgcgacgggtcaaggcctgta
acccaccagatgctgggcccatggttgtccattgcagtgccggcgtgggccgaactggtt
gcttcattgtcattgatgccatgcttgagcggatgaagcatgagaagaccgtggacatct
atggccacgtgacatgcatgcgctctcagcgcaactacatggtgcagacagaggaccaat
acatcttcatccacgaggccttgctggaggcagccacatgtggcaataccgaggtgcctg
cacgcaacctctttgctcacatccagaagctgacccaggtgccaccaggcgaaagtgtca
ctgcaatggagctggaattcaagctgctcgccaactctaaagcacatacctcacgtttca
tcagtgccaacctcccgtgcaacaaattcaagaaccgcctcgttaacatcatgccatatg
agctgacgagagtctgtctgcagcccatccggggtgttgagggctctgattacatcaatg
ccagcttcatagatgggtacaggcagcagaaggcctacatcgccacacagggaccgttgg
ctgagaccacagaggatttctggcggatgctttgggagcacaactccaccatcgtggtga
tgttgacaaagctgcgcgagatgggccgggagaagtgccatcagtactggcccgcagagc
gctctgcccgctaccagtacttcgtggtggaccccatggcagagtacaacatgccgcagt
acatcctccgtgagttcaaggtgacggatgccagggatggccagtcacggaccatccgcc
agttccagttcacagactggcctgagcagggcgtgccaaagacgggagagggcttcatcg
acttcatcgggcaggtgcacaagaccaaggagcagtttgggcaggacggacccatcacgg
tgcactgcagcgctggggtcgggcgcacgggcgtgtttatcacgctcagcatcgtgctgg
agaggatgcgctacgagggggtggtggacatgttccagacggtgaagaccttgcggacgc
agcggccagccatggtgcagacagaggaccagtaccagctgtgctacagagcggcactgg
agtatcttggcagcttcgaccactatgcaacgtaa
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integrated database retrieval system
