Gavia stellata (red-throated loon): 104263903
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Entry
104263903 CDS
T08384
Symbol
OTOF
Name
(RefSeq) otoferlin
KO
K19949
otoferlin
Organism
gste
Gavia stellata (red-throated loon)
Brite
KEGG Orthology (KO) [BR:
gste00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gste04131
]
104263903 (OTOF)
Membrane trafficking [BR:
gste04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
104263903 (OTOF)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2
FerB
dsrm_Ferlin
FerI
HSP70
Motif
Other DBs
NCBI-GeneID:
104263903
NCBI-ProteinID:
XP_009819063
LinkDB
All DBs
Position
Unknown
AA seq
1577 aa
AA seq
DB search
TSISIEIKYQALDGTVGTWNDKEFLENPSVHSEGDGRYPLETDSLLSGHRQGLDISPGKS
NQQSAERSFRSKGKEKTKEHKAGKGVFSAMKLGKTRPSKDDHRKQDEPAVLEAEDLDRKA
MRQGCGLDPDTISLASVTAVTTNVSNKRSKPDIRMELSAGRPMDYQVSITIIEARQLVGL
NMDPVVCVEVGEEKKYTSMKESTNCPYYNEXXXFDFHVPPDVMFDKIIKLSVIHSKNLLR
SGTLVGSFKMDVGTVYTQPEHQFYHKWAILSDPEDLTAGLKGYLKCDIAVLGKGDNIKTP
HKANETDEDDIEGNLLLPDGVPPERQWARFYIKIYRAEGLPRMNTSIMANVKKALIGENK
DLVDPYVQVVFAGQKGKTSIQKSSYEPLWNEQIVFTEMFPPLCKRIKIQIRDSDKVNDVA
IGTHFIDLRKISNEGDKGFLPTFGPAWVNMYGSTRNYTLMDEHQELNEGLGEGVSFRARL
LMSLAVEILDTTNPEINSSTEVQVEQATSIADNCTGKMEEFFLFGAFLEATMIDRKIGDK
PINFEVTIGNYGNQIDGMTKPVLRRKKDGGEGDEEESELLQNSSEDEGDEDGELVSVSSS
QPVKPLVTDRNYFHLPYFEKKPCIYIKSWWQDQRRRLYNANIMDKIADKLEEGLNDVQEM
IKTEKPHPERRLRGVLEELSSGCLRFVTLADKDQHHSSRTRLDRERLKSCMRELENMGQQ
ATTLRSQVKKNTMKDKLKLVQNFLQKLRFLADEPQHTIPDIFIWMMSNNKRIAYARIPSK
DILYSIVDEEMGKDCAKVKTIFLKLPGKRGFGPAGWTVQAKMEMYLWLGLNKQRKDFLSG
LPCGFEEKKTTRGQNLPSFPPISLLYTKKQVFQLRAHMYQARSLFAADSSGLSDPFARVF
FNSQSQCTEVLNETLCPTWDQLLVFDNVELYGEAHEMRDDPPIIVIEIYDQDTVGKADFM
GRTFAKPVVKMLDEHYCPPRFPPQLEYYQIYRGNSTAGDLLAAFELLQIGPGGKSDLPPI
DGPTDMDRGPILPVPLGIRPVLSKYRVEILFWGLRDLKRVNLAQVDRPRVDIECAGKGVQ
SALIQNYKKNPNFSTLVKWFEVDLPENELLHPPLNIRVVDCRAFGRYTLVGSNTVSSLRK
FIYRPPDKKAQHWNMTGEIVVNMEPEVPIKKMETMVKLEANSDAVVKVDVSEEEKEKKKK
KKRGGGEEVEEEEPDESMLDWWSKYFASIETMKEQLRQQEAAAAEVEEKEEMEIAEGSKG
QAKNKEKSKAPKDEKKKKQQSTPELPEKKNKQKIDELKVFNKELETEFDNFEDWLHTFNL
LRGKIGDNDDNATEEERIVGRFKGSVCVYKVPLPDDIAKEAGYDPNFGMFQGIPSNDPIN
VLVRVYIVRATDLHPADINGKADPYIAIKLGKTDIKDKENYISKQLNPVFGKSFDIEATF
PMESMLTVAVYDWDLVGTDDLIGETKIDLENRYYSKHRATCGVSQTYSIHGYNTWRDPMK
PSQILSKLCKEGKVDGPHFGPGGRVKVANRVFTGPTEIEDENGQKRQTDEHLALSVLRHW
EDIPRAGCKLVPEHVET
NT seq
4732 nt
NT seq
+upstream
nt +downstream
nt
accagcatctccatagagatcaagtaccaggctctggacgggactgtgggcacgtggaac
gacaaggagttcctggagaaccccagcgtccactcagagggggatggcaggtacccctta
gagacagacagcctcctctccggccaccggcagggcttggacatctctccaggcaaatcc
aaccagcagtccgcagagaggagcttcaggagcaaaggcaaagagaagacgaaggagcac
aaagctgggaaaggagttttttcagccatgaagcttggcaagacgcgtccgtcaaaggat
gaccatcggaaacaagatgaacccgctgttttggaagcagaagacctggaccgaaaagcc
atgagacagggatgtggactggatccagacaccatctccttggcctccgtcacagctgtc
accaccaatgtctcgaataagaggtccaagcctgacatcagaatggagctgagtgctggg
aggccgatggattaccaggtcagcatcaccatcatcgaggcccggcagctggttgggctc
aacatggaccccgtggtctgcgtggaggtcggagaggaaaagaaatacacgtctatgaag
gaatcaaccaattgcccttactacaatgagnnnnnnnnctttgatttccacgtcccccca
gatgtcatgttcgacaagatcatcaagctgtccgtgatccactcaaaaaacctcttgcgc
agtgggactttggttggctccttcaagatggacgttggaactgtttatactcagcctgag
caccagttctaccacaaatgggccattctttctgaccccgaggatctaaccgctgggctg
aaaggttacctgaagtgtgacatcgccgtcttagggaaaggggacaacatcaagacacca
cacaaagccaatgagacggatgaggatgatattgaagggaaccttctcctcccggatggg
gtccctccggagaggcagtgggctcgtttctacatcaagatctatcgagcagagggactg
ccccgtatgaacaccagcatcatggccaatgtgaagaaggctcttattggggagaacaag
gacttggtagacccctacgtgcaggtggtcttcgcagggcagaaggggaagacatctata
caaaaaagcagctatgagcctctctggaatgagcaaatagtcttcacagaaatgttcccc
ccattgtgcaagcggataaagatccagatccgagactcagacaaagtcaatgatgtggcc
attggtacccatttcattgatttgcggaagatctccaatgaaggagacaaaggcttcctg
cccacctttggccccgcatgggtgaacatgtatggctccactcggaactacaccctgatg
gacgagcaccaagagctgaacgagggtctgggtgaaggcgtctccttccgagccaggctt
ttgatgagtcttgctgtggagatcttggacaccaccaacccggagatcaacagctccacc
gaggtgcaagtcgagcaggccacatcaattgctgataactgcactgggaagatggaggag
ttctttctcttcggagccttcctggaagctaccatgatcgacaggaaaattggtgacaaa
cccatcaacttcgaggtcacaataggtaactatgggaaccagatcgatggcatgaccaaa
cctgtcctgcggaggaagaaagacggaggggaaggggatgaggaggagtccgagctgctc
cagaactcaagcgaggatgaaggtgatgaggatggagaactggtctctgtttcctcatct
caacccgtgaagcccctggtcacagacaggaactacttccacttgccgtactttgagaag
aagccctgcatctatatcaagagctggtggcaggaccagcgccgcagattgtataatgcc
aacatcatggacaagattgcggacaagctggaggaagggctcaacgatgtgcaggaaatg
atcaagacggagaagccgcacccggagcgccggctccgaggggtcctggaggagctgagc
agtggatgcttgcgctttgtgacattggctgacaaggaccagcaccactcttcccgcacg
aggctggaccgggagaggctcaagtcctgcatgcgggagctggagaacatggggcagcaa
gccacgactctgcggtcgcaagtgaagaagaacaccatgaaggacaagctgaagctggtg
caaaacttcctgcagaaactccggttcttggcggacgagccccagcacactattcctgac
atcttcatttggatgatgagcaacaacaagcgcattgcctacgcccgcatcccttccaag
gatatcctctactccattgtggatgaggagatgggcaaggactgcgccaaagtgaagacc
atcttcctcaagctacctggaaagaggggctttggacctgctggctggacagttcaggcc
aagatggagatgtacttgtggctgggcctcaacaaacagcgcaaagacttcttgagtggc
ctgccctgtggctttgaggagaagaagaccaccagaggccaaaacctgccatccttccca
cccatcagcctcctttacaccaagaagcaggttttccagctgcgagcccacatgtaccaa
gccaggagtttatttgcggccgacagcagtggcctttcggacccctttgcacgagtcttc
ttcaactcccagagccaatgcaccgaggttctcaatgagaccctgtgcccaacctgggac
cagctgctggttttcgacaatgtggagctgtatggagaagcccatgagatgcgggatgac
cctcccataattgtcattgagatctatgaccaggacacagtgggcaaagctgacttcatg
ggccgcacctttgccaaaccagtggtgaagatgttggatgagcactactgtcccccacgc
ttccccccacagctggagtactaccagatctaccggggcaactccacagcgggtgacctg
ctggctgccttcgagctgctccagattggccctgggggcaagtcagacctgcccccaatt
gatgggcccacagacatggaccggggccccatcctgccggtgccactggggattcgtccg
gtgctgagtaaatacagagtggagatcttgttttgggggctgagggatctgaagagagtg
aacctggcccaggtggaccggccccgggtggacattgagtgtgctgggaagggagtccag
tcagctctcatccagaactacaagaaaaaccccaacttcagcactttggtcaagtggttt
gaagtggacctcccagagaatgagctgctccacccacccctcaacatccgagtggtggac
tgccgggctttcgggcgttacaccctggtgggatccaacactgtcagctccctccgaaag
ttcatctaccgcccaccagataagaaagcccagcactggaatatgacaggggagatcgtt
gtcaatatggaacctgaggttcccatcaagaagatggagacgatggtgaagctggaagct
aactcggatgcagtggtgaaggtggacgtgtctgaggaagagaaggagaaaaagaaaaag
aagaagagaggaggaggagaggaagtagaagaggaggagccagacgagagcatgctggac
tggtggtccaagtattttgcttcaattgagaccatgaaggagcaactccggcagcaggaa
gcagccgcagcagaagtggaggagaaggaagaaatggagattgcagaaggctccaagggt
caggcgaagaacaaggagaagtccaaagcacccaaagacgagaagaaaaagaagcaacag
tcaacccccgagcttcccgagaagaagaacaagcagaagattgacgaactgaaggtcttc
aacaaagagctggaaacagagtttgacaactttgaggactggctgcacaccttcaacctg
ctccgcgggaagatcggggacaacgacgacaatgcaacagaagaggagcggatagtgggg
aggttcaaaggctccgtgtgtgtctacaaagtgccgctgcctgatgatatcgccaaggag
gcaggatatgaccccaacttcggcatgttccaggggatccccagcaacgaccccatcaat
gtgctggtccgagtctatattgtgcgggccacggaccttcacccagctgacatcaacggg
aaagctgacccctatattgccatcaaactggggaagacggacatcaaggacaaggagaac
tacatctccaagcagttgaaccctgtcttcggaaaatcctttgacattgaggccaccttc
cccatggagtccatgctgacagtggccgtgtacgactgggacttggtggggactgatgac
ctcattggagagaccaagattgacctggagaaccgctactacagcaagcaccgagctact
tgtggggtgtcacagacttactccatacatggttataacacctggcgtgaccccatgaag
ccctcccaaatcctgtccaagctgtgcaaagagggcaaggtggacgggccgcactttggg
ccgggaggaagagtgaaagttgccaacagggtcttcaccggccccacggagattgaggat
gaaaatggtcagaagaggcagacggatgagcacctggccctgagtgtgctgcgccactgg
gaagacatcccacgggcaggctgcaagctggtccccgagcacgtggagacgc
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integrated database retrieval system