Gavia stellata (red-throated loon): 104263949
Help
Entry
104263949 CDS
T08384
Symbol
TDG
Name
(RefSeq) G/T mismatch-specific thymine DNA glycosylase
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
gste
Gavia stellata (red-throated loon)
Pathway
gste03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gste00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
104263949 (TDG)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gste03400
]
104263949 (TDG)
Enzymes [BR:
gste01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
104263949 (TDG)
DNA repair and recombination proteins [BR:
gste03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
104263949 (TDG)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
GAGA_bind
Motif
Other DBs
NCBI-GeneID:
104263949
NCBI-ProteinID:
XP_009819122
LinkDB
All DBs
Position
Unknown
AA seq
399 aa
AA seq
DB search
YYAYLQQAQAFYAFPFHQMMTAAPNMEIMTEQPTLEGIPEPNIVQEPPKEVKKGGRKRKA
KATEPKQPKKPAAKKEKSAKSKGKQEKITDTFKVKRKVDRFNGVSEAELLTKTLPDILTF
DLDIVIIGINPGLMAAYKGHHYPGPGNHFWKCLFMSGLSNEQLNHMDDHTLPHKYGIGFT
NMVERTTPGSKDLSSKEFREGGRILMQKLQKYKPRIAAFNGKCIYEIFSKEVFGIKVKNL
EFGLQPHKVPDTETLCYVMPSSSARCAQFPRAQDKVHYYIKLKDLRDQLKGIAPNTEVQE
VQYTFDLQLAQEDAKKMAVKEEKYDPGYEAAYGGAYCDRAPYESEQCSFSSNGTASNPQY
CEGSSFGEVPNGQWMTQSFADQIPEFNAGVMREEEGNSA
NT seq
1201 nt
NT seq
+upstream
nt +downstream
nt
atactacgcatatcttcagcaggctcaagctttttacgcatttccgttccatcaaatgat
gactgcagcgcctaacatggaaatcatgactgagcagccgactctagagggcattccaga
gccaaacattgttcaggagcctccaaaagaagttaaaaaaggaggaaggaaaagaaaagc
caaagcaactgagccaaagcaacccaaaaagcctgctgctaaaaaagaaaaatcagccaa
atcaaaaggcaaacaagaaaagatcacagatacttttaaagtcaagagaaaggtagaccg
ttttaatggtgtatctgaagctgaacttctgaccaagactttacctgatattttgacctt
tgacctggacattgtaataattggcataaaccctggcttgatggcagcttacaaaggaca
tcattaccctggacctggaaaccatttttggaagtgtctgttcatgtctggtctaagtaa
tgaacagctgaaccatatggatgatcacaccttgccacataaatacgggattggatttac
aaacatggttgaaaggacaacacctggaagcaaagacctctccagcaaagagtttcggga
aggagggcgaattctgatgcagaagttacaaaagtataaacctcgtatagcagctttcaa
tggaaaatgtatttatgaaatttttagtaaagaagtttttggaataaaagttaagaactt
ggaatttggactgcagccacacaaggtgccagatacagaaactctctgctatgttatgcc
atcatccagtgcaagatgtgctcagtttccccgtgcacaagataaagttcattattacat
aaagctgaaggacttaagggatcaactgaaaggcatcgcaccaaacacagaggtgcagga
ggtgcagtacacatttgacttgcaacttgcacaagaggatgctaaaaagatggctgtcaa
agaagaaaaatatgatccaggttatgaagcagcgtatggaggagcttactgtgatcgtgc
accgtatgaaagcgaacagtgcagtttctcttcaaatggaactgcaagcaatccacagta
ctgtgaggggtcatcctttggtgaagttcctaatggacaatggatgacacagtcctttgc
agaccagattccggagttcaatgctggtgtgatgcgggaagaagagggaaacagtgcgta
a
DBGET
integrated database retrieval system
