Geomonas subterranea: KP001_04405
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Entry
KP001_04405 CDS
T07936
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
gsub
Geomonas subterranea
Pathway
gsub01501
beta-Lactam resistance
gsub01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
gsub00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
KP001_04405
01503 Cationic antimicrobial peptide (CAMP) resistance
KP001_04405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gsub03036
]
KP001_04405
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gsub02000
]
KP001_04405
01504 Antimicrobial resistance genes [BR:
gsub01504
]
KP001_04405
Chromosome and associated proteins [BR:
gsub03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
KP001_04405
Transporters [BR:
gsub02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
KP001_04405
Antimicrobial resistance genes [BR:
gsub01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
KP001_04405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
CusB_dom_1
HlyD_3
Biotin_lipoyl_2
DUF6687
DUF5667
Motif
Other DBs
NCBI-ProteinID:
QXE91790
LinkDB
All DBs
Position
1004798..1006087
Genome browser
AA seq
429 aa
AA seq
DB search
MQIKYRAQLVSVVVVLSGSLLLAGCGKKQQAGGPPMGPPEVGVVEVKPERVALTTELPGR
TSPYLIAEVRPQVSGIILKRVFTEGSDVKAGQVLYQIDPATYQAAYASAKASEARAEANV
LPARLKEERFRELVKINAVSKQDYDAAYAALKQAEADVASAKAAVETARINLAYTKVTAP
ISGRIGRSTVTDGALVTANQPTALATIQQLSTMYVDVTQSSSDMLKLNRSLATGLLKRDQ
AGQARVKLLLEDGTAYPVTGSLKFSDVTVDQSTGSITVRALFPNPKQTLLPGMFVRAVLE
EGINEAAILIPQRGVTRNAAGQAIVMVVGAENKVEPRPIQVSRTVGDAWLVSSGLKPGEK
VILEGLQKARPGTQVKVVPFQSPEGQGGPGGAPGAAGQGGAGAAGAAGAKPAAAGAPAAP
AAPAQPQKK
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcaagtacagggcacagttagtatccgtcgttgtagttctgagcggctccctg
cttctcgccgggtgcggcaagaagcaacaggccggcggcccgccgatgggaccccccgag
gtgggcgtcgtcgaggtgaagcctgagcgcgtggccctgaccaccgagcttccggggcgc
acctccccttacctcatcgccgaggtccgtccccaggtgagcggcatcatcctgaagcgg
gtctttaccgagggtagcgacgtcaaggccggccaggtgctctaccagatcgatcccgcg
acctaccaggccgcctacgccagtgccaaggcctccgaggcgcgcgccgaagccaacgtc
ctccccgccaggctgaaggaggagcgcttccgcgaactggtcaagatcaacgcggtcagc
aagcaggattacgatgccgcctacgccgcgctgaagcaggccgaggccgacgtggcctcc
gccaaggcagccgtggaaacggcgcgcatcaacctggcctacaccaaggtgaccgccccc
atctccggccgcatcggtcgctccaccgtgaccgacggcgccctggtgaccgccaaccag
ccgaccgccctggcgaccatccagcagctctccaccatgtacgtcgacgtgacccagtcg
agctcggacatgctgaagctgaaccgcagcctcgccaccggcctgttgaagcgtgaccag
gcggggcaggcacgggtcaagctcctcctcgaggacggcaccgcgtaccccgtgaccggc
tccctcaagttctccgacgtgacggttgaccagagcaccggctccatcacggtgcgcgcc
ctgttccccaatccgaagcagaccctgctcccggggatgttcgttcgcgcggtcctggaa
gaggggatcaacgaggcggcgatcctgatcccgcagcgcggcgtgacccgcaacgcagcc
ggccaggccatcgtcatggtggtgggtgccgagaacaaggtggagccgaggccgatccag
gtgtcccgcaccgtgggcgatgcctggctggtgagctccggcctgaagcctggcgagaag
gtgatcctggaggggctgcagaaggcgcgtccgggtacccaggtgaaggtggttccgttc
cagtcccccgaagggcagggcggccccggcggcgcacccggtgcggcaggtcagggtggc
gcaggcgccgcaggtgccgcaggtgccaaacccgctgctgcgggcgccccggcagccccg
gcggctccggcgcagccccagaagaagtag
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