Geomonas subterranea: KP001_18030
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Entry
KP001_18030 CDS
T07936
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K22466
5-hydroxybenzimidazole synthase [EC:
4.1.99.23
]
Organism
gsub
Geomonas subterranea
Pathway
gsub00860
Porphyrin metabolism
Brite
KEGG Orthology (KO) [BR:
gsub00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
KP001_18030 (thiC)
Enzymes [BR:
gsub01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.23 5-hydroxybenzimidazole synthase
KP001_18030 (thiC)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
DUF4368
Motif
Other DBs
NCBI-ProteinID:
QXE90291
LinkDB
All DBs
Position
4114099..4115406
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AA seq
435 aa
AA seq
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MKTQIEAARAGIITPQMAQVAFDEEVTPEYVRDKVAAGQIVIPWNHVRKPKVAGIGTGLR
TKVNASIGTSSDIIDYEAEVRKAQVAQQAGADTLMELSVGGDLDRVRREVIAAVDLPVGN
VPLYQAFCEAARKYGDPNKLDEEMLFDIIERQCADGMAFMAVHCGINLYTLERLRKQGYR
YGGLVSKGGVSMAAWMIANNRENPLYEKFDRVVEILKRYDTVLSLGNGLRAGAIHDSSDR
AQIQELLINCELAELGRDMGCQMLVEGPGHVPLDEVEGNIKLQKRMSGGAPYYMLGPIST
DVAPGFDHITAAIGAAQSSRYGADLICYITPAEHLALPNEEDVKMGVKAAKIAAYIGDMN
KYPERGRERDKEMSKARRDLNWQRQFELALFPEDAAAIRKSRVPEDEQTCTMCGDFCASR
GAGKIFAEHLRGDKI
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacgcagattgaagcggcgcgcgcggggatcataaccccgcagatggcgcaggtg
gcattcgacgaagaggtaacaccggaatacgtccgggacaaggtggccgcggggcagatc
gtcatcccgtggaaccacgtgaggaagccgaaggtggccggcatcggcaccggactgcgc
acaaaggtgaacgcatccatcggcacctcgtcggacatcatcgattacgaggccgaagtg
cgcaaggcacaggtggcgcagcaggcgggggcggacacgctgatggagctctcggtcggc
ggggacctggaccgggtgcgtcgcgaggtgatcgccgccgtcgacctgccggtgggtaac
gtgccgctctaccaggcgttctgcgaggcagccaggaagtacggcgatcccaacaagctg
gacgaggagatgctcttcgacatcatcgagcgccagtgcgccgacggcatggccttcatg
gcggtgcactgcggcatcaacctctacaccctggagcgcctgaggaaacagggataccgc
tacggcggcctggtctccaaggggggcgtcagcatggccgcgtggatgatcgccaacaac
cgcgagaacccgctctacgagaagttcgaccgtgtggtggagatcctgaagcgctacgac
accgtgctctcgctgggtaacggcctcagggccggcgccatccacgactccagcgaccgc
gcccagatccaggagctgctgatcaactgcgagctggccgaactcggccgcgacatgggg
tgccagatgctggtggaagggccggggcacgtgccgctggacgaggtcgaggggaacatc
aagctgcaaaagcgaatgagcggcggagccccctattacatgctgggcccgatttccaca
gacgtggcgccgggcttcgatcacatcaccgccgccattggcgcggcccagtcctcgcgt
tacggcgccgacctgatctgctatatcacgccggccgagcatctggcgctcccgaacgag
gaagacgtcaagatgggtgtcaaggcggccaagatagccgcctacatcggtgacatgaac
aagtaccccgagcgggggagggagcgcgacaaggagatgagcaaggcgcgccgggatctg
aactggcagcgtcagttcgagctggccctcttccctgaggacgccgcagccatcaggaag
agccgcgtccccgaggacgagcagacctgtaccatgtgcggcgacttctgcgcctcccgc
ggcgccggaaagatcttcgcggaacatctgcgcggggacaagatttga
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