Gardnerella swidsinskii: K9E37_04075
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Entry
K9E37_04075 CDS
T08402
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
gsw
Gardnerella swidsinskii
Pathway
gsw03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gsw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
K9E37_04075 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gsw03400
]
K9E37_04075 (nth)
Enzymes [BR:
gsw01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
K9E37_04075 (nth)
DNA repair and recombination proteins [BR:
gsw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
K9E37_04075 (nth)
Prokaryotic type
K9E37_04075 (nth)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
UQA88194
LinkDB
All DBs
Position
1046658..1047332
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AA seq
224 aa
AA seq
DB search
MIYQSSNMRESKQAKLARIYAEYDLLCKEIPEPKCALNFKNPFELLIATVLSAQTTDKRV
NIVTPELFSIFPNASSLAAAPVSQVESIIYPLGFYRVKAQNIISLSACLLNNFSGIVPSN
MEALISLPGVGRKTANVVLGNAFGLPGFPVDTHVIRVTGRLGWRKVQNRPNPVAIEREIT
AYFAPKEWTNLSHRLILHGRKICTARNPKCVSCPLNTTCPSAII
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgatttatcaaagttctaatatgcgagaatcaaaacaagcgaaattagctcgtatttat
gcagagtacgatttattgtgcaaagaaataccggaacctaagtgtgcattaaatttcaaa
aatccatttgagctactaattgctactgtattaagcgcgcaaactacagataagcgtgtg
aatatcgtgacgcctgaactcttttctattttccccaacgcgagttctttagctgctgct
cctgtatctcaagttgagtcaattatttaccctctcggattttatagagtaaaagcacag
aacattatttcattatctgcatgtttgcttaataatttttctggtatagtgccatcaaat
atggaagctttaatatcgttgccaggtgttggtcgtaaaactgccaatgtcgttcttggc
aacgcatttggattaccggggtttcctgtagatactcacgtaatacgtgttacaggtcgt
cttggttggcgtaaggttcagaatcgtccaaatcctgttgctattgagcgcgaaataact
gcttattttgctcctaaagagtggactaatctctctcatagacttattttgcatggcaga
aaaatttgcactgctcggaacccaaaatgtgtttcatgccctttaaatacaacatgtccg
tcggcaattatttaa
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