Geovibrio thiophilus: EP073_04105
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Entry
EP073_04105 CDS
T05803
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
gtl
Geovibrio thiophilus
Pathway
gtl01501
beta-Lactam resistance
gtl01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
gtl00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
EP073_04105
01503 Cationic antimicrobial peptide (CAMP) resistance
EP073_04105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gtl03036
]
EP073_04105
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gtl02000
]
EP073_04105
01504 Antimicrobial resistance genes [BR:
gtl01504
]
EP073_04105
Chromosome and associated proteins [BR:
gtl03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
EP073_04105
Transporters [BR:
gtl02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
EP073_04105
Antimicrobial resistance genes [BR:
gtl01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
EP073_04105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSH_RND
HH_MFP_RND
RND-MFP_C
Beta-barrel_RND
YknX_C
HH_EMRA
BSH_CusB
Beta-barrel_RND_2
HH_AAEA_pHBA
CzcB_C
HH_YBHG
BSH_CzcB
Motif
Other DBs
NCBI-ProteinID:
QAR32618
UniProt:
A0A3R6AXB6
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All DBs
Position
871562..872710
Genome browser
AA seq
382 aa
AA seq
DB search
MNSKLLVFAGLAAAVVIGLVIWKSGSSATAAQPQGGGERPPAEVTVYTVKTESVIFTKEL
PGRTSAVRVAEIRPQVSGIIIKRLFKEGGSVSAGQQLYQIDSAPFQAAYDSAQAELMRAE
ASLQSAAPKAERYTELVKVGGVSSQEYDDAVTALAQAKASVAAAKAAVATAKINLDYTKV
FSPISGHIGKSSVTEGALVTANQANALARVQQLDSIYVDVSQSAEAVMKLRRMVTEDGTL
GSSAEVELLIGNKPYGHKGVMQFSDVTVDETTGMVQLRVLFPNPERELLPGLFVKASVGQ
AKDDAAILIPQQAAVRNADGSVIVWAVDAENTVNPRPVQVSDALGNKWLVSSGLQSGDRV
VVEGLQKIAPGAKVNPVEQKAE
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgaattcaaagttattggttttcgcaggtttagctgctgcggttgttattggtttggtt
atatggaaaagcggaagcagcgctaccgcagcccagccgcagggcgggggggaaagaccg
cccgcagaggtcactgtttatacggtgaagacggagtcggttatctttacaaaagaactg
cccggacgcacctcagcagtgagagtggcggagatacgcccgcaggtttcgggaatcata
attaaaagactttttaaagagggcggcagtgtaagtgccggacagcagctttatcagata
gactccgctccttttcaggcggcttatgacagcgctcaggcggagctgatgagggctgag
gcgagtctccagtccgcagctcccaaagctgagagatacaccgagcttgtaaaagtgggc
ggtgtcagctcacaggagtatgatgacgctgttaccgctctggcgcaggcaaaggcatcg
gttgcggcagccaaggcggctgttgccacagcaaaaattaatctcgattacaccaaggtt
ttttcccctatatccgggcatatcggcaaatcgtccgtgacggagggcgctcttgttacg
gctaatcaggcaaacgcccttgcgagggttcagcagcttgacagcatatatgtcgacgta
agtcagtcagcggaggcagtaatgaagctccgccggatggttacggaggatggaacactg
ggctcaagcgcagaggttgagcttctcataggcaacaagccatacggacataaaggtgtc
atgcagttctcggatgttactgtggatgagacgacaggaatggttcagctccgtgttctt
ttccccaaccccgaaagggagcttcttcccgggctttttgttaaggcaagtgtcgggcag
gcgaaggacgatgccgctattctcattcctcagcaggctgcggtgagaaacgccgacggc
agcgtgatagtttgggcggttgacgctgaaaacacagttaacccccgtcctgttcaggtt
tcagacgctttgggcaataaatggcttgtcagctccggtcttcagtccggcgacagagtt
gttgttgaaggtcttcagaaaatagcccccggcgcaaaagtaaacccggttgaacagaaa
gccgaatag
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