Geovibrio thiophilus: EP073_04110
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Entry
EP073_04110 CDS
T05803
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
gtl
Geovibrio thiophilus
Pathway
gtl01501
beta-Lactam resistance
gtl01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
gtl00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
EP073_04110
01503 Cationic antimicrobial peptide (CAMP) resistance
EP073_04110
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gtl02000
]
EP073_04110
01504 Antimicrobial resistance genes [BR:
gtl01504
]
EP073_04110
Transporters [BR:
gtl02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
EP073_04110
Antimicrobial resistance genes [BR:
gtl01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
EP073_04110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
FlaC_arch
Motif
Other DBs
NCBI-ProteinID:
QAR32619
UniProt:
A0A3R5UY38
LinkDB
All DBs
Position
872736..875873
Genome browser
AA seq
1045 aa
AA seq
DB search
MSNFFIDRPIFAWVIAIIIMLAGVLAIETLPVEQYPQIAPPTVTINASYPGASAETLENS
VTQVIEQKLVGIDYLRYFASTSDGTGNVEITLTFEPEANPDIAQVQTQNKIQSAMSSLPQ
EVQQLGVTVEKSNNSFLMVVGLYSKDGSMTQNQIGDYISSNMADPLSRVLGVGSLQVFGQ
PFSMRIWLNPDKLNSYNLNTDEIISAVSAQNADVSAGQLGGNPAVDGQQINATITAQSRL
KTVEDFENIFLKVNTDGSQIRLKDVARIELGVQNYDFVSRYMGKPAAGMAVSLATGANAL
ETANSVKAKVAELEEFMPEGMEVVYPYDTTPFVKISIEEVVKTLLEAIVLVFLIMYLFLQ
NFRATLIPTIAVPVVLLGTFGILSAFGFTINVLTMFAMILAIGLLVDDAIVVVENVERVM
SEEGLSPKDATRKSMNQITGALVGIALVLSAVFVPMAFFKGSTGAIYRQFSITIVSAMVL
SVVVALVLTPSLCASMLKPVEKGHKEHMTGFFGWFNRMFNRSRTAYRTSVGYVAARAFRF
FIIYVVIIAGLGYMFTKIPTSFLPDEDQGMMFVQVSTPPGATQERTLESVKKVEKYFLEQ
EQETVASIFTVTGFSFAGRGSNTAMGFVRLKDWEERTEEHQKVFAVAQRAMVNLSSIKDA
FVFAFYPPPIIALGNATGFDLQLLDRGGLGHEALVNARNQLLGMAGQDKRLVGVRPNGFD
DVPQFKIHVDHEKASALGVSISDINNTLKTAWGSSYINDFLHEQRIKKVYIQGDAEYRML
PEDIYKWYVKNSNGDMVPFSSFATAEWEYGSPKLERYNGASSQEIMGAPASGISSGEAMQ
IMEEYAGQLPTGISLEWTGISYEERAAGAQTGLLYGLSLLIVFLSLAALYESWSVPFAVM
LIVPLGIVGTVAATLSAGLANDVYFQVGMLTTIGLASKNAILIVEFAKDLHDSGYGLLRS
AMIASEQRLRPILMTSLAFILGVTPLAISNGAGSASQNAIGIGVIGGMTSATFLAILFVP
MFFIVIMKQFGKRTDADAKETKNGK
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatttcttcatagatcgtcccattttcgcatgggtgattgccatcataataatg
cttgcgggagttctcgccattgagacccttcctgtggagcagtatccgcagatcgcccct
cccacggtgacgatcaacgcaagctatccgggcgcatcagcggaaacgctggaaaacagc
gttactcaggttatagagcagaagcttgtgggtattgactatcttcgttacttcgcgtcc
accagtgacggaacgggtaacgttgagattacactgacgtttgaaccggaagcaaatccg
gatattgcgcaggtacagactcagaacaagattcagtccgcaatgtcctcccttccgcag
gaggttcagcagctcggtgttacggtcgaaaaatcgaacaacagctttctcatggttgtg
ggtctttactctaaagacggctccatgacccagaaccagattggcgactacataagctca
aacatggcagacccgctcagcagggttctcggcgtgggttcgcttcaggttttcggtcag
cccttctccatgcgcatatggctaaaccctgacaagcttaacagctataatctgaacacc
gatgaaattataagcgctgtcagtgcgcagaacgcggatgtttccgcagggcagctcggc
ggtaaccccgctgtggacggtcagcagatcaatgctacaatcaccgctcagtcaaggctt
aaaactgttgaggattttgaaaacatctttcttaaagtaaacaccgacggttcgcagatc
cgcctgaaggatgtggcaaggattgagctcggcgttcagaattatgacttcgtgtcccgc
tatatgggtaagcctgccgcgggcatggcggtgagtctcgccacaggtgcgaatgccctt
gaaaccgcaaacagtgttaaggcaaaggtcgctgaacttgaggagtttatgccggagggt
atggaagtcgtctacccttatgacactacccctttcgtgaaaatatctatcgaagaggtt
gtgaaaacccttctcgaagcgattgtgctggtgttcctcatcatgtatctgtttcttcag
aacttcagggcaacgctgatccccacgatagccgttcccgttgttcttttgggtacgttc
ggaatactttcggcgttcggtttcaccatcaacgttcttacgatgtttgctatgattctc
gccatcggtcttcttgtggatgatgccatagttgttgtggaaaacgttgaaagggttatg
agcgaggaaggtctttctcccaaggacgccacaaggaaatcaatgaaccagatcacaggc
gcccttgtgggtatagcccttgttctttctgcggttttcgtccccatggcgttcttcaag
ggatcaacaggagccatataccgccagttctccattacgatagtttcggcgatggtgctt
tcggttgttgtcgccctagtgcttacaccttccctttgcgcgtcaatgctcaaacctgtg
gaaaaagggcacaaggagcacatgacaggcttcttcggctggttcaaccgcatgttcaac
cgcagcagaaccgcttacagaacaagtgtcggatatgtggcggcaagagcattcaggttt
ttcattatttatgtggtgatcattgccggtctcggttatatgttcaccaaaataccaaca
tcattccttcccgatgaggatcagggtatgatgttcgtacaggtttccacacctcccgga
gccactcaggaaagaacccttgagagcgtgaagaaggttgagaaatacttccttgaacag
gagcaggaaactgtggcgagtatattcacagttacgggcttcagctttgccggacgcggc
tccaacaccgcaatgggcttcgttcgtcttaaggactgggaagagaggacagaagagcat
cagaaggtgtttgcagtggcgcagagagccatggtgaacctctcctccataaaagacgct
tttgtgttcgcattctatccgcccccaattatcgcactgggcaacgctacaggcttcgat
cttcagcttcttgacagaggcggtctggggcatgaggcgcttgtgaatgcgagaaaccag
cttctcggcatggcggggcaggataaaaggcttgtgggcgtgcgccccaacggctttgac
gatgtgcctcagttcaagatccatgtggatcatgaaaaggcaagcgcactcggcgtttcc
atcagcgatataaacaacactctgaaaacagcttggggttcgtcatacataaacgacttc
ctccacgaacagcgtatcaaaaaagtgtacattcagggtgacgcagagtacaggatgctg
cctgaggatatatataaatggtacgtaaagaacagcaatggcgatatggttcccttttct
tcttttgcgactgcggaatgggaatacggatcgccgaagcttgagcgctacaacggtgct
tcatctcaggagatcatgggtgctcccgcttcggggataagctccggtgaggctatgcag
atcatggaggaatacgcagggcagcttcccacgggcatcagccttgagtggacgggaata
tcatatgaagagcgtgcggcgggcgcccagacagggcttctttacggactttcgcttctc
atcgtgttcctgtctcttgcggcgctgtacgaaagctggtctgtaccctttgccgtcatg
ctcatagtgcctcttggtattgtgggaaccgtcgcggcgacactctccgccggacttgcc
aatgacgtttattttcaggtgggtatgcttaccacaatcggtctggcatcgaaaaacgcc
atcctgatcgttgagttcgcaaaagacctccacgacagcggctacgggctgctccggtcc
gctatgatagcctcagagcagaggctcagaccgatccttatgacttcactggcgttcata
ctcggcgttactccccttgccatatcaaacggcgcgggctcagccagccagaacgccata
ggtataggcgttatcggcggtatgacctccgccacattccttgccatactgtttgttccg
atgttttttattgttataatgaagcagttcggaaaacgcacagatgctgacgctaaggag
actaagaatggtaagtaa
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