Geovibrio thiophilus: EP073_13545
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Entry
EP073_13545 CDS
T05803
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
gtl
Geovibrio thiophilus
Pathway
gtl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gtl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EP073_13545 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gtl03400
]
EP073_13545 (nth)
Enzymes [BR:
gtl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
EP073_13545 (nth)
DNA repair and recombination proteins [BR:
gtl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
EP073_13545 (nth)
Prokaryotic type
EP073_13545 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
HHH_5
RecR_HhH
HHH_8
MSC
Ogg-HhH
Motif
Other DBs
NCBI-ProteinID:
QAR34387
UniProt:
A0A3R5UZQ5
LinkDB
All DBs
Position
complement(2933503..2934156)
Genome browser
AA seq
217 aa
AA seq
DB search
MDKKTKVLRLMEFLDSRYANAECSLRHENPFQLLTATILSAQCTDARVNIVTEELFRKYP
TPKDLADADMEELCGDIKPTGFFRNKAKSLIGMGKKLVSNHGGEVPGTMEELIKIPGVGR
KTANVILGNCFGRPAVVVDTHVKRIAFRIGLTGNTDPEKIEQDLIKIIPPERSAEWSHQV
ILFGREICTARAPKCGECPVNGICADYAARIKKHFKP
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atggataaaaagacaaaagttttaagactcatggagtttctggacagccgctacgcaaac
gccgaatgctcactgaggcatgaaaacccgtttcagctactcaccgcgactattctcagc
gcccagtgcactgacgcgcgtgtgaatatagtgacggaggaactgttcaggaaatatccc
acacccaaggatcttgcggatgcggatatggaagagttgtgcggggatataaagcccacg
ggcttcttccgcaacaaagcgaaaagcctaatcggaatgggcaaaaagcttgtcagtaac
cacggcggcgaagtgccgggcaccatggaggagctgatcaaaattcccggagtgggcaga
aaaacggcaaacgttattctcggcaactgtttcggaagacctgccgtggtggtggacacc
catgtgaagcgtatcgccttccgcataggactcaccggaaacacagacccggagaagatc
gagcaggatctcattaaaatcattccccctgagcgcagcgccgaatggtcgcatcaggtg
atactcttcgggcgggagatctgcacagcccgcgcgccaaagtgcggcgaatgtccggtt
aacggaatatgcgcagattacgcggcgagaatcaaaaagcattttaaaccttga
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