KEGG   Gloeophyllum trabeum: GLOTRDRAFT_101369
Entry
GLOTRDRAFT_101369 CDS       T03130                                 
Name
(RefSeq) RING/U-box
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
gtr  Gloeophyllum trabeum
Pathway
gtr03420  Nucleotide excision repair
gtr04111  Cell cycle - yeast
gtr04120  Ubiquitin mediated proteolysis
gtr04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:gtr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    GLOTRDRAFT_101369
   04120 Ubiquitin mediated proteolysis
    GLOTRDRAFT_101369
  09124 Replication and repair
   03420 Nucleotide excision repair
    GLOTRDRAFT_101369
 09140 Cellular Processes
  09143 Cell growth and death
   04111 Cell cycle - yeast
    GLOTRDRAFT_101369
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:gtr04121]
    GLOTRDRAFT_101369
   03400 DNA repair and recombination proteins [BR:gtr03400]
    GLOTRDRAFT_101369
Enzymes [BR:gtr01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     GLOTRDRAFT_101369
Ubiquitin system [BR:gtr04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   GLOTRDRAFT_101369
  Multi subunit type E3
   SCF complex
    Ring finger protein
     GLOTRDRAFT_101369
   Cul2 complex
     GLOTRDRAFT_101369
   Cul3 complex
     GLOTRDRAFT_101369
   Cul4 complex
     GLOTRDRAFT_101369
   Cul7 complex
     GLOTRDRAFT_101369
   Cul8 complex
     GLOTRDRAFT_101369
   Cul9 complex
     GLOTRDRAFT_101369
DNA repair and recombination proteins [BR:gtr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      GLOTRDRAFT_101369
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      GLOTRDRAFT_101369
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4_2 zf-C3HC4
Other DBs
NCBI-GeneID: 19298424
NCBI-ProteinID: XP_007869782
JGI: Glotr1_1_101369
UniProt: S7RCG0
LinkDB
Position
Unknown
AA seq 110 aa
MADSNMDVDPPTTAVSKKEGKQRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIDCQA
NQISATSEDCNAAWGICNHAFHFHCISRWLKTRNVCPLDNREWELQKYGR
NT seq 333 nt   +upstreamnt  +downstreamnt
atggcggactcgaatatggacgtggaccctccgacgacggcggtgagcaagaaggagggg
aagcagcggttcgaggtcaagaagtggaatgccgtcgctctgtgggcttgggacatcgtc
gtagacaactgcgccatctgcaggaaccacatcatggatctctgcatcgattgccaggcg
aaccagatctccgccacgagcgaggactgcaacgccgcgtggggcatctgcaaccacgcc
ttccacttccactgcatctcgcggtggctcaagacgaggaatgtgtgcccgctcgataat
agagagtgggagctgcagaagtacggccgataa

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