Gloeophyllum trabeum: GLOTRDRAFT_136147
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Entry
GLOTRDRAFT_136147 CDS
T03130
Name
(RefSeq) P-loop containing nucleoside triphosphate hydrolase protein
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
gtr
Gloeophyllum trabeum
Pathway
gtr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gtr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GLOTRDRAFT_136147
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gtr03019
]
GLOTRDRAFT_136147
Messenger RNA biogenesis [BR:
gtr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
GLOTRDRAFT_136147
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
AAA_25
AAA_15
SMC_N
AAA_28
AAA_23
RsgA_GTPase
AAA
PduV-EutP
VapE-like_dom
MMR_HSR1
NACHT
Motif
Other DBs
NCBI-GeneID:
19303477
NCBI-ProteinID:
XP_007862266
JGI:
Glotr1_1_136147
UniProt:
S7QIQ0
LinkDB
All DBs
Position
Unknown
AA seq
288 aa
AA seq
DB search
MSAISVKNLTYSHKPGISPSLTDIDLDLPPGSRTILIGANGAGKSTLLQILAGKRLVSAP
GADIRVQGKDVFREYLHGVTFLGTEWAMNPVVRGDIVVASFLDSVGGWRYKERRDELLDI
LDVDLDWHMHQISDGERRRVQLVMGLMQPWDVLLLDEVTVDLDVLVRDDLLSFLQADSEK
RNATIIYATHIYDGLNNFPTHIAHMRFGKMVTPPTSWPPSASDAHAVDITSKLGPNPLLY
HTALQWLKEDREHRRELEAQGRKTRGARRNETVPSDSETFYRKYDYSH
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgatctccgtcaaaaacttgacctactcccacaaacccggcatatctccctca
ttaactgatatagatcttgatttaccgccagggtcacgcactatactcattggtgcaaat
ggagccgggaaatccactcttctacagattttggctggcaagagattggtctcagcgcca
ggagcagatatccgcgtccaaggcaaggatgtcttccgtgaatacctccacggtgtcact
ttcctcggcaccgaatgggctatgaacccggtcgtgcgcggtgacatcgtggtggcttca
ttcctcgactctgtgggcggctggaggtacaaggaacgcagggacgagctgctggatatt
ctcgatgtcgacttggactggcacatgcatcagatatcggatggagaacgacgtcgtgtg
cagctcgtcatgggtttaatgcaaccctgggatgtcctgcttctggatgaggttactgtg
gaccttgatgtcctagtccgcgatgacctactatcattcctccaagccgacagtgagaaa
cggaatgccaccatcatttatgcaactcatatatatgatgggttgaacaacttcccgact
cacattgcccatatgcgcttcgggaagatggtcactcctcctacctcatggccgccatcc
gcgtctgacgcgcacgccgttgacattacctcgaaactcggacccaatccgctgttgtac
cacacggcgttgcagtggctgaaggaagatcgagaacaccgccgcgagctggaggcccaa
ggtaggaagactcgaggtgcacgcagaaatgagactgtaccgtcagattcggagacgttc
tatagaaaatacgactatagtcattaa
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