Guillardia theta: GUITHDRAFT_144995
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Entry
GUITHDRAFT_144995 CDS
T02925
Name
(RefSeq) U5 small nuclear ribonucleo protein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
gtt
Guillardia theta
Pathway
gtt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gtt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
GUITHDRAFT_144995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gtt03041
]
GUITHDRAFT_144995
Spliceosome [BR:
gtt03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
GUITHDRAFT_144995
Complex C
U5 SnRNP specific factors
GUITHDRAFT_144995
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
MMR_HSR1
EF-G_D2
Motif
Other DBs
NCBI-GeneID:
17294187
NCBI-ProteinID:
XP_005824418
JGI:
Guith1_144995
UniProt:
L1IMD4
LinkDB
All DBs
Position
Unknown
AA seq
990 aa
AA seq
DB search
MEDELYDEFGNYIGPEEEEDDDQEEEEDDLENAYRSGLPHGHDAEEDLMEEDKDDEGPSQ
AVILHEDKKYYPDAEQVYPEAETTVQDEDTQPLEQPIIAPVRTKSFDCVEKKTPVNPYSH
VYLHQLSGNPALVRNICVAGHLHHGKTSLLDVLVRQTHNFGKLQEHEFERKWDGCEDLRY
MDSRVDEQKRKITIKSLPISLLMPSSGGKSYALNFMDTPGHVNFIDEVAASVAIADGMLL
VVDAVEGVMLNTERVIQLAAAQRIPICLVLNKIDRLVLELKLPPADAYFKLKHVIEEVNT
IYTSFTGNNEEILSPHLGNVCFASSLQGYTFTLESYARLYADTYGGFPAKEFAKRLWGDF
WYNEETRKFQRTPPATGAQRTFVQFLLEPLYKLMSQVVGEEPKELDMVLQELSLSVKRSH
LQKSVKALLRSVMSAFFADNSGLVDMVVKSIPSPLEATGTKVETNYTGAFDTDFAKSIKR
CSAEGPLAIHIVKLYHQPDCVGFNAYGRIISGTVSIGDKVKVLGEGYTLDDDEDMVETTV
TDIWLHAGRYKIPIDQATAGMWVLIGGIDDSIIKTATVVHSEGPEDACIFRPLQHKTKSV
VKLAIEPLNPSELPKMLDGLRKVNKTYPLLGTKVEESGEHLILGTGELYLDCVMHDLRFM
YSEIEIKTADPSVSFCETVIETSSLKCFAETPNKKNKLTLIAEPLEKGLAEDIELGEILM
TWDRKRQASFLQSKYDWDVLAARSVWAFGPDMNGPNVLVDDTLPSEVDKQMLATVKDSVV
QGFQWGTSSLNHREGPLCDEPIRNVKFKILDASVDSSPVHRGSGQIIPTGRRVCYSAFLM
ASPRLMEPVFYVEIQAPADCLSAIYTVLARRRGHVVQDIPKAGSPLYTIKAYIPVMDSYG
FETDLRTHTQGQAFCVQVFDHWAIVPGDPLDKSIVLKPLEPSPAPYLAREFMVKTRRRKG
MSEDVSINKFFDDPMLLELARQDQDLASYF
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgaactatacgacgagttcggcaattacatcggacctgaggaagaggaggac
gatgatcaggaggaggaggaggatgatctcgagaatgcctacagatctggtcttccccat
ggacacgatgcagaagaagatctcatggaagaggataaggatgatgaggggccaagtcaa
gctgtgattcttcatgaggacaagaagtattatccagacgctgagcaggtttatcccgaa
gcagagacaacggttcaggatgaagacactcagcccctcgagcagcctattattgctcct
gtccgaaccaaaagcttcgattgcgtcgagaagaagacccctgtgaatccatacagccat
gtttacctgcatcagttgtcggggaatccagctctcgtccgcaacatctgcgtggcaggg
catcttcatcatgggaaaacctcgttgcttgatgtgttggtgagacagacacataacttc
ggaaaactgcaggaacacgagtttgaaagaaagtgggatggttgcgaggatctgaggtac
atggatagccgagtggacgagcagaagcgaaagattacgatcaaatctctccccatcagt
cttctgatgccctcaagcggcggcaagtcgtatgctttgaacttcatggacacccctgga
catgttaatttcattgatgaggttgcagcctctgttgctattgcagatggaatgctgctt
gtggtggatgcagttgaaggagtgatgctgaatacagaacgagtaattcagcttgcagct
gcgcagcgaatccctatttgcttggttctcaacaagattgaccgcctggtcctggaactg
aaattgccaccggctgatgcatacttcaagcttaaacatgttatcgaagaagtcaacaca
atctacacatctttcacaggaaacaatgaggagatcctgtcgccgcatttaggaaatgtc
tgcttcgcttcttctctgcagggctacaccttcactttggaatcgtatgcgaggttgtat
gcggatacatatggaggctttcctgccaaagaatttgccaagaggctttggggagacttc
tggtacaatgaagaaactcgcaaatttcagcgaactcctcctgccactggtgcacagcga
actttcgtacaattccttcttgagccgctctacaagttgatgagccaggtcgttggtgaa
gagccgaaggagttggacatggtcctgcaagagctcagcctaagtgtaaagagatcacac
ttgcagaagagcgtcaaagcgcttcttcgtagtgtgatgagtgctttcttcgcggacaat
tcaggacttgttgatatggtggtgaaaagtattccgtctcccttggaggcgacgggcaca
aaggtggaaacaaattatacaggagcttttgataccgactttgccaagtctatcaagcgg
tgttcagcggaggggccgctcgcgatccacattgtaaaattgtatcatcaaccggattgt
gttgggttcaatgcgtacggcagaatcatctcaggtacagtttctattggggacaaagta
aaggtcctaggtgaaggatacactttggacgatgatgaagacatggtggagacgactgtc
actgacatctggctgcatgctggtcggtataagataccgatagaccaagcgacagcagga
atgtgggtgctgattgggggcattgacgattctattatcaagacagcgacagtggttcac
tcagagggaccagaagacgcatgcatcttccgtcctcttcagcacaagacaaagtcagtg
gtgaaacttgcgatcgaaccattgaacccgtcagagctccccaagatgcttgacggcttg
cgtaaagtgaacaagacttatccattgctcggaaccaaagtggaggagtctggggagcat
ttgattctgggaacgggagagctgtacttggactgcgtgatgcacgatttgaggtttatg
tattcagaaatcgaaatcaagacagcagatccctccgtctccttctgcgaaactgtgatt
gagacttcctcgttgaagtgtttcgcggaaacgccgaataagaagaacaagttgactttg
attgcggagccgcttgagaagggacttgctgaggacattgagctcggagagatcctcatg
acttgggacaggaagcgacaagcgagtttcctccaaagcaagtacgattgggatgtactt
gctgcacgatccgtgtgggcgtttggacctgacatgaacgggccgaatgttttggttgat
gatacccttccatcggaggtagacaagcagatgcttgctaccgtcaaggattctgtggtc
cagggattccaatggggaaccagctcactgaaccacagggaggggcccctttgtgatgaa
cctattcgaaatgttaaattcaagatcttagatgcatctgtggattcatctcccgtgcac
agaggaagcggacaaatcatccccactggaaggcgcgtctgctactccgcctttctcatg
gcctctccgagattgatggaacctgtattctatgtcgagattcaagcacctgcggactgt
ctgtcagccatctacacagtcttggcgagacgacgtggtcacgtcgtacaggacattccc
aaggcaggttcgccactctacaccatcaaggcttacatccccgtcatggactcgtatggc
ttcgagacggacttgcgcacccacacgcagggacaggctttctgtgtgcaggtgttcgat
cactgggccatcgtccccggagatcctctggacaagagcatcgtcctgaagcctctagag
ccctcgcccgccccctacctggcgcgtgagttcatggtgaagacaaggcgaaggaaggga
atgagtgaggacgtgtcgatcaacaagtttttcgacgaccctatgctgctggagctcgcc
cgacaggaccaggatctggcctcctacttctag
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integrated database retrieval system
