Guillardia theta: GUITHDRAFT_65510
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Entry
GUITHDRAFT_65510 CDS
T02925
Name
(RefSeq) hypothetical protein
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
gtt
Guillardia theta
Pathway
gtt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gtt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GUITHDRAFT_65510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gtt03019
]
GUITHDRAFT_65510
Messenger RNA biogenesis [BR:
gtt03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
GUITHDRAFT_65510
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
AAA_15
AAA_30
Motif
Other DBs
NCBI-GeneID:
17308805
NCBI-ProteinID:
XP_005839092
JGI:
Guith1_65510
UniProt:
L1JUM0
LinkDB
All DBs
Position
Unknown
AA seq
281 aa
AA seq
DB search
SAMNESAISLRSASFSWPSGERALSDVSMDLPQGCRSIVVGANGAGKTCLLRIVGGMYHY
EGSVKVFGKEAYVPNRLGNSGSVEIICGTNIWRQGECTIVGERWQPRGDCSVRSMLDLLS
DWDRDRMQMIVDKFHIDLNWRVNQLSDGKKRRVQLLLAFLKPSAILLLDEVTTDLDVLAR
QSLLQFLQEENEKRSVTILFSTHIFDGLEEWGTHVTYIKHGTLCFNKPMDQIEELAVLRQ
QEYLTPLFEFVCRRVHEDAAEYRRKRAEPREQCLTGPVEVN
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
agcgccatgaatgaatccgccatttcccttagaagcgccagcttctcatggccctctggt
gaacgagcgctgagtgacgtgagcatggacctcccacaaggatgtcgatcaatcgtagta
ggtgccaacggggcaggaaagacgtgcttgcttcgaatcgttggtggcatgtatcattac
gaaggaagtgtcaaggtttttggaaaggaggcatacgtgccaaacagacttggcaacagt
ggatctgttgaaatcatctgtgggaccaacatctggcgtcaaggagaatgcactattgtt
ggtgagaggtggcagccaaggggggactgcagtgtcaggagcatgctggacctgttatcg
gactgggaccgtgacaggatgcagatgatcgtggataagtttcatatcgacttgaactgg
cgtgtgaaccagctcagtgatggaaagaagcgcagagttcaactcctgcttgctttcttg
aaaccttctgcaatcctcctcttggatgaggtgactaccgatcttgacgtgctggcaaga
cagagtttgcttcagtttctccaggaagaaaacgagaaaagatcggtgactatcctgttc
tcaactcatatctttgatgggcttgaggagtgggggacccacgtgacctatatcaaacat
gggacgctgtgcttcaacaaaccaatggatcagatcgaagagctcgccgtccttagacag
caggagtatttgaccccgctgtttgagttcgtctgtcggagggttcatgaagacgctgcg
gagtatagaaggaagcgtgctgagccgagagaacagtgcttgacgggacctgtagaagtg
aactag
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