Guillardia theta: GUITHDRAFT_70214
Help
Entry
GUITHDRAFT_70214 CDS
T02925
Name
(RefSeq) hypothetical protein
KO
K12622
U6 snRNA-associated Sm-like protein LSm3
Organism
gtt
Guillardia theta
Pathway
gtt03018
RNA degradation
gtt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gtt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
GUITHDRAFT_70214
09123 Folding, sorting and degradation
03018 RNA degradation
GUITHDRAFT_70214
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gtt03019
]
GUITHDRAFT_70214
03041 Spliceosome [BR:
gtt03041
]
GUITHDRAFT_70214
Messenger RNA biogenesis [BR:
gtt03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
GUITHDRAFT_70214
mRNA degradation factors
5'-3' decay
Lsm complex
GUITHDRAFT_70214
Spliceosome [BR:
gtt03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
GUITHDRAFT_70214
Complex C
U2 snRNP components
GUITHDRAFT_70214
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
DUF4941
Zn-C2H2_12
Motif
Other DBs
NCBI-GeneID:
17303474
NCBI-ProteinID:
XP_005833951
JGI:
Guith1_70214
UniProt:
L1JEQ4
LinkDB
All DBs
Position
Unknown
AA seq
97 aa
AA seq
DB search
MAGKGGTNVDEPLDLLRLSLDERIYVKMRGDRELRGKLHAYDQHLNMVLGEVEEVVTVVE
YDEDTFEEHVKMTKRNIDMLYVRGDGVILVSPPLRTS
NT seq
294 nt
NT seq
+upstream
nt +downstream
nt
atggcggggaaaggagggacgaacgtggacgagccgctggatctgctgagactgtcgctg
gacgagaggatctatgtgaagatgagaggagacagagagctcaggggaaagttgcatgct
tatgatcagcatttgaacatggttttgggggaagtcgaagaagttgtaactgtagtagaa
tatgacgaagatactttcgaagagcacgtcaagatgactaagaggaacatcgacatgttg
tatgtaagaggagatggagtcatcctagtttcgccccctttgagaaccagttag
DBGET
integrated database retrieval system