Geotalea uraniireducens: Gura_1305
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Entry
Gura_1305 CDS
T00521
Name
(GenBank) DNA ligase, NAD-dependent
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
gur
Geotalea uraniireducens
Pathway
gur03030
DNA replication
gur03410
Base excision repair
gur03420
Nucleotide excision repair
gur03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gur00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Gura_1305
03410 Base excision repair
Gura_1305
03420 Nucleotide excision repair
Gura_1305
03430 Mismatch repair
Gura_1305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gur03032
]
Gura_1305
03400 DNA repair and recombination proteins [BR:
gur03400
]
Gura_1305
Enzymes [BR:
gur01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
Gura_1305
DNA replication proteins [BR:
gur03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Gura_1305
DNA repair and recombination proteins [BR:
gur03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
Gura_1305
NER (nucleotide excision repair)
GGR (global genome repair) factors
Gura_1305
MMR (mismatch excision repair)
DNA ligase
Gura_1305
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Gura_1305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
HHH_5
BRCT
DNA_ligase_ZBD
HHH
PTCB-BRCT
E1-E2_ATPase
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
ABQ25506
UniProt:
A5GA98
LinkDB
All DBs
Position
complement(1538363..1540381)
Genome browser
AA seq
672 aa
AA seq
DB search
MDKQAAERRIQELHKEINRHNYLYYVEDRPEINDAEYDLLLRELQQLEKAYPDLVTADSP
TQRVGAAPLEKFSQVTHRMPMLSLENAFNEEEMHDFDERIKRFLGLAAGDEIEYVCEPKM
DGLAVELVYENGDFTVGSTRGDGYVGEDVTQNLRTVKTIPLSLAIATPPRLFEVRGEVYL
GLAPFQKLNVEREEAGDPPFANPRNAAAGSLRQLDSRITARRPLSIFCYAAGSLEGHEFT
SQSDLLNTIPGWGLPVNPLIRKVSGIGGVLAYYHEMSEKRESLPYEIDGVVVKVDSFDLQ
RELGEKTRSPRWAIAWKFPPRQAVTVVEEIVPQVGRTGVITPVAHLRPVEVSGVMVSRAT
LHNWEEMEKKDIRKGDTVVVERAGDVIPAVVKVITEKRKGDEQPLPIPANCPECGSEVVK
IPGEVAVRCLGLSCPAQIRETIIHFASRHAMDIDGMGDKYIEQLLKLGLVKNVADLYYLK
KDDFMRFERMGDKLAENLLGAIETSKQRELSRFIYALGIRHVGEHTAKLLANAFGSMENL
EHASEEELLSIREVGPQVAQSIRTFFHNRNNIEVIDRMFNAGVKPSVEEKRVGGRFTGKT
FVFTGALTRFTRDDAKRMVENEGGHAAGSVSKKTDFVVAGAEAGSKLDKARQLGVKVLTE
DEFLAMLGVCRT
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atggacaaacaggccgcagagcgccgcatacaggaacttcacaaggaaataaaccgccac
aactacctctattacgtggaagaccggccggagatcaacgacgccgagtacgacctgctc
ctgcgcgagttgcagcaactggaaaaggcataccccgaccttgtcactgccgattctccc
acccagcgggtcggggcagctccgctggaaaagttctcccaggtgacccaccgcatgccg
atgctctcactggaaaatgccttcaacgaagaggagatgcatgacttcgacgaacggatc
aagcgattcctcggccttgccgccggcgatgaaatagaatatgtctgcgaaccgaagatg
gacggcctggcagtggaactggtctatgagaacggcgacttcaccgtcggctcgacccgc
ggcgatggatatgtaggtgaagacgtgacccagaacctgcggacagtcaagaccatcccg
cttagccttgccatcgccaccccaccgcggctcttcgaggtgcgtggcgaggtctacctc
ggccttgccccatttcaaaagctgaacgtggaacgggaagaggccggcgaccctccattc
gccaacccgcggaacgccgcagccggcagtttgcgccagctcgactcgcggataaccgcc
cggcgccccctctccatcttctgctatgcggcaggctctctggaaggtcacgagttcacg
tcgcaaagcgacctgctcaacaccattcccggttggggactgccggtcaaccctctgatc
agaaaggtttccggcatcggcggggtactcgcctattaccacgagatgagcgagaaacgg
gagtcgctcccctacgagatcgacggcgtggtggtcaaggtcgattcctttgatctgcag
cgggagctgggagaaaagacccgctcgccccgctgggccattgcctggaaattcccccca
cgccaggcggtcaccgtggtcgaggagatcgtcccccaggttggtcgcaccggcgtcatc
accccggtggcccatctccggccggtggaggtatcgggggtgatggtgtcccgcgctact
ttgcacaattgggaggagatggagaaaaaggacatccgcaagggggacacggtggtggtg
gagcgggccggggacgtgatcccggcggtggtgaaggtcatcaccgagaagcgtaaaggc
gacgaacaaccgctacccatccccgccaactgccccgaatgcggctcagaagtggtgaag
atccccggcgaggtggcggtccgctgcctcggcctctcctgtccggcgcagatccgcgaa
accatcatccatttcgcctcgcgccacgccatggatatcgacgggatgggggacaaatac
attgaacagctgctgaagctcggcctggtgaaaaatgtcgccgacctctattacctgaag
aaggatgacttcatgcgcttcgagcggatgggagacaaactggcggaaaacctcctgggc
gccatcgaaacaagcaagcagcgggagctatcccgattcatctacgccctcggcatccgc
cacgttggagagcatacggcaaagcttctggcaaacgccttcggcagcatggagaacctg
gagcacgcctcggaagaggaactcctctccatccgcgaggtcggcccccaggtggcgcag
agcattcgtaccttcttccacaaccgtaacaacatcgaggtgatcgaccggatgttcaac
gccggggtgaagccatccgttgaggagaaaagggtcggcggcaggttcacaggcaagacc
ttcgtcttcaccggcgcccttacccgcttcaccagggacgacgccaagcggatggtggaa
aacgagggggggcacgccgccggctcggtatcgaagaagaccgacttcgtcgtggccggc
gcagaggctgggtcgaagctggacaaggcacgacagctaggggtgaaggtgctcacggaa
gacgagtttttagcgatgttaggagtctgtcggacttag
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integrated database retrieval system
