Gloeobacter violaceus: glr0727
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Entry
glr0727 CDS
T00148
Name
(GenBank) ORF_ID:glr0727
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
gvi
Gloeobacter violaceus
Pathway
gvi03030
DNA replication
gvi03410
Base excision repair
gvi03420
Nucleotide excision repair
gvi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gvi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
glr0727
03410 Base excision repair
glr0727
03420 Nucleotide excision repair
glr0727
03430 Mismatch repair
glr0727
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gvi03032
]
glr0727
03400 DNA repair and recombination proteins [BR:
gvi03400
]
glr0727
Enzymes [BR:
gvi01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
glr0727
DNA replication proteins [BR:
gvi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
glr0727
DNA repair and recombination proteins [BR:
gvi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
glr0727
NER (nucleotide excision repair)
GGR (global genome repair) factors
glr0727
MMR (mismatch excision repair)
DNA ligase
glr0727
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
glr0727
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
HHH_5
DNA_ligase_ZBD
Nlig-Ia
BRCT_2
PTCB-BRCT
zf-tcix
RNA_pol_A_CTD
Zn_ribbon_NUD
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
BAC88668
UniProt:
Q7NMN8
LinkDB
All DBs
Position
775813..777819
Genome browser
AA seq
668 aa
AA seq
DB search
MSTTVPPEIEEHTRTLRALLHRWGYAYYVLDAPEVSDAIYDQHYRELVDLESRYPELVSP
DSPTRRVGERPASAFVSVTHRVPMFSLENAFSQAELEKWGERLLRAIGPGLEFICELKID
GSATALSYEDGVLVRGATRGDGVEGEEITQNLRTIRAIPLKLLGGEVPAVLEVRGEAFIP
RDEFERINQERQAAGEKLFANPRNACAGTLRQLDSRVVASRRLGFFAYTAHYGRAESQWE
ALAELESHGFRVNPHRSLCRDLAEVRTFCEHWENHRHELPYDTDGVVVKVNAFDHQREVG
FTSKFPRWAIAFKYPAEEKSTVVEAIAVQVGRTGALTPVAELQPVAVAGTTVSRATLHNQ
DRIESLDVRVGDTVIIRKAGEIIPEVVRVIGELRPPEAVPYVFPQTCPECGTAVVRAPGE
AAVRCPNPRCPALIRGKLGHWCAALEIDGIGDKLIARLVSLGLVHTVADLYELSAEQLAG
LERLGARSAAKIVEQLDRSHRQPWSRVLYGLGLRHIGASVSVELARAFASADALARADLA
AIASLYGFGEELARSVVEWFAQAENRALLERLKAHGLQLAGGGRAAQSSALAGLTFVITG
TLPTLSREECTALIESHGGKVTSSVSSRTSYVVAGEKAGSKLARAQDLKVAVLDEEQLRA
LIETREMP
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgtccacaaccgtcccccccgagatcgaggagcacacccggacgttgcgcgcgcttttg
caccggtggggctacgcctattatgtgctggatgctcccgaggtgagcgacgccatctac
gaccagcactaccgcgaactggtcgacctcgaaagccgttatccggagcttgtcagcccc
gattcacccacccggcgcgtcggggagcgccccgcctcggcctttgtgagtgtcacccac
cgggtgccgatgttctccctcgagaacgccttcagccaggcggaactcgaaaaatggggc
gaaaggctgctgcgtgcaatcggcccgggtctggagtttatctgcgaactgaaaatcgac
ggatctgccactgccttgagttacgaggacggagtgctggtgcgcggcgccacccgcggc
gacggcgtcgagggtgaagaaattacccagaacctgcgcacgatccgggcgattcctctc
aagctgctggggggcgaggtaccggcggtgctggaggtgcgcggcgaggcgttcataccc
cgcgacgaatttgagcgcatcaaccaggagcgccaggcggccggtgaaaaactgttcgcc
aacccgcgaaacgcctgcgccggcaccctcagacaactcgattcgcgggtggtggcctcg
cgccgcctgggcttttttgcctacaccgcccactacggccgcgccgaaagccagtgggaa
gcgctcgcagaactcgaaagccacggctttcgggtcaacccccaccgcagtctgtgccgg
gatctggccgaggtgcggacgttttgtgagcactgggagaaccaccgccacgagttgccc
tacgacaccgacggcgtggtggtcaaagtcaatgcctttgaccatcagcgggaggtgggt
ttcaccagcaaatttccgcgctgggcgattgccttcaagtaccctgccgaagaaaaaagc
accgtcgtcgaagcgattgccgtccaggtcgggcgcaccggggcgctcacgccggtggcc
gaactgcagccggtggcggtggcagggacgacggtcagccgggcgaccttgcacaaccag
gatcgtatcgagtctctcgatgtgcgggtcggagacaccgtaattattcgcaaggcgggc
gagattatcccggaggtggtacgggtgatcggcgaattgcgcccgcccgaagccgtgccc
tacgtttttccccagacctgtccggagtgcggcacggcggtagtgcgcgccccgggcgag
gcggcggtgcgctgtccaaacccccggtgcccggcgctcatccgggggaagctcggccac
tggtgcgcggccctcgaaatcgacggcatcggcgacaagctcatcgccaggctggtaagc
ctcggcctggtccatacggtggcggatctgtacgaactgagcgcagagcaactggcgggc
ctggagcgtctgggcgcccgttcggccgccaagattgtcgagcaactggaccgctcgcac
cgccagccctggagccgggtgctctatggcctggggctgcgccacatcggtgcgagcgtc
tcggtggagttggcccgcgctttcgcaagcgccgatgctctcgcccgagccgacctggct
gctatcgcttcgctctacggctttggagaggagttggcccgctcggtggtcgagtggttc
gcgcaagcagaaaaccgcgcactgctcgaacggctcaaagcccacggtctacagctggcc
ggcggcgggcgggccgcccagagcagtgccctggcggggctcaccttcgtgatcaccggt
acgctgccgacgctgtcgcgcgaggagtgcaccgccctcatcgagagccacggcggcaag
gtgaccagttcggtgagcagccgtaccagctacgtggtggcgggtgaaaaagccggctcc
aaactcgcccgtgcccaggatctgaaggtggccgtcctggatgaggagcaattgcgggcg
ctcatcgagacgcgtgagatgccgtga
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integrated database retrieval system