KEGG   Gloeobacter violaceus: glr0727
Entry
glr0727           CDS       T00148                                 
Name
(GenBank) ORF_ID:glr0727
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
gvi  Gloeobacter violaceus
Pathway
gvi03030  DNA replication
gvi03410  Base excision repair
gvi03420  Nucleotide excision repair
gvi03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:gvi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    glr0727
   03410 Base excision repair
    glr0727
   03420 Nucleotide excision repair
    glr0727
   03430 Mismatch repair
    glr0727
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:gvi03032]
    glr0727
   03400 DNA repair and recombination proteins [BR:gvi03400]
    glr0727
Enzymes [BR:gvi01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     glr0727
DNA replication proteins [BR:gvi03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     glr0727
DNA repair and recombination proteins [BR:gvi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     glr0727
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     glr0727
   MMR (mismatch excision repair)
    DNA ligase
     glr0727
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      glr0727
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT HHH_5 DNA_ligase_ZBD Nlig-Ia BRCT_2 PTCB-BRCT zf-tcix RNA_pol_A_CTD Zn_ribbon_NUD Auto_anti-p27
Other DBs
NCBI-ProteinID: BAC88668
UniProt: Q7NMN8
LinkDB
Position
775813..777819
AA seq 668 aa
MSTTVPPEIEEHTRTLRALLHRWGYAYYVLDAPEVSDAIYDQHYRELVDLESRYPELVSP
DSPTRRVGERPASAFVSVTHRVPMFSLENAFSQAELEKWGERLLRAIGPGLEFICELKID
GSATALSYEDGVLVRGATRGDGVEGEEITQNLRTIRAIPLKLLGGEVPAVLEVRGEAFIP
RDEFERINQERQAAGEKLFANPRNACAGTLRQLDSRVVASRRLGFFAYTAHYGRAESQWE
ALAELESHGFRVNPHRSLCRDLAEVRTFCEHWENHRHELPYDTDGVVVKVNAFDHQREVG
FTSKFPRWAIAFKYPAEEKSTVVEAIAVQVGRTGALTPVAELQPVAVAGTTVSRATLHNQ
DRIESLDVRVGDTVIIRKAGEIIPEVVRVIGELRPPEAVPYVFPQTCPECGTAVVRAPGE
AAVRCPNPRCPALIRGKLGHWCAALEIDGIGDKLIARLVSLGLVHTVADLYELSAEQLAG
LERLGARSAAKIVEQLDRSHRQPWSRVLYGLGLRHIGASVSVELARAFASADALARADLA
AIASLYGFGEELARSVVEWFAQAENRALLERLKAHGLQLAGGGRAAQSSALAGLTFVITG
TLPTLSREECTALIESHGGKVTSSVSSRTSYVVAGEKAGSKLARAQDLKVAVLDEEQLRA
LIETREMP
NT seq 2007 nt   +upstreamnt  +downstreamnt
atgtccacaaccgtcccccccgagatcgaggagcacacccggacgttgcgcgcgcttttg
caccggtggggctacgcctattatgtgctggatgctcccgaggtgagcgacgccatctac
gaccagcactaccgcgaactggtcgacctcgaaagccgttatccggagcttgtcagcccc
gattcacccacccggcgcgtcggggagcgccccgcctcggcctttgtgagtgtcacccac
cgggtgccgatgttctccctcgagaacgccttcagccaggcggaactcgaaaaatggggc
gaaaggctgctgcgtgcaatcggcccgggtctggagtttatctgcgaactgaaaatcgac
ggatctgccactgccttgagttacgaggacggagtgctggtgcgcggcgccacccgcggc
gacggcgtcgagggtgaagaaattacccagaacctgcgcacgatccgggcgattcctctc
aagctgctggggggcgaggtaccggcggtgctggaggtgcgcggcgaggcgttcataccc
cgcgacgaatttgagcgcatcaaccaggagcgccaggcggccggtgaaaaactgttcgcc
aacccgcgaaacgcctgcgccggcaccctcagacaactcgattcgcgggtggtggcctcg
cgccgcctgggcttttttgcctacaccgcccactacggccgcgccgaaagccagtgggaa
gcgctcgcagaactcgaaagccacggctttcgggtcaacccccaccgcagtctgtgccgg
gatctggccgaggtgcggacgttttgtgagcactgggagaaccaccgccacgagttgccc
tacgacaccgacggcgtggtggtcaaagtcaatgcctttgaccatcagcgggaggtgggt
ttcaccagcaaatttccgcgctgggcgattgccttcaagtaccctgccgaagaaaaaagc
accgtcgtcgaagcgattgccgtccaggtcgggcgcaccggggcgctcacgccggtggcc
gaactgcagccggtggcggtggcagggacgacggtcagccgggcgaccttgcacaaccag
gatcgtatcgagtctctcgatgtgcgggtcggagacaccgtaattattcgcaaggcgggc
gagattatcccggaggtggtacgggtgatcggcgaattgcgcccgcccgaagccgtgccc
tacgtttttccccagacctgtccggagtgcggcacggcggtagtgcgcgccccgggcgag
gcggcggtgcgctgtccaaacccccggtgcccggcgctcatccgggggaagctcggccac
tggtgcgcggccctcgaaatcgacggcatcggcgacaagctcatcgccaggctggtaagc
ctcggcctggtccatacggtggcggatctgtacgaactgagcgcagagcaactggcgggc
ctggagcgtctgggcgcccgttcggccgccaagattgtcgagcaactggaccgctcgcac
cgccagccctggagccgggtgctctatggcctggggctgcgccacatcggtgcgagcgtc
tcggtggagttggcccgcgctttcgcaagcgccgatgctctcgcccgagccgacctggct
gctatcgcttcgctctacggctttggagaggagttggcccgctcggtggtcgagtggttc
gcgcaagcagaaaaccgcgcactgctcgaacggctcaaagcccacggtctacagctggcc
ggcggcgggcgggccgcccagagcagtgccctggcggggctcaccttcgtgatcaccggt
acgctgccgacgctgtcgcgcgaggagtgcaccgccctcatcgagagccacggcggcaag
gtgaccagttcggtgagcagccgtaccagctacgtggtggcgggtgaaaaagccggctcc
aaactcgcccgtgcccaggatctgaaggtggccgtcctggatgaggagcaattgcgggcg
ctcatcgagacgcgtgagatgccgtga

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