Galeopterus variegatus (Sunda flying lemur): 103602934
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Entry
103602934 CDS
T08727
Symbol
KDM2B
Name
(RefSeq) lysine-specific demethylase 2B
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
gvr
Galeopterus variegatus (Sunda flying lemur)
Pathway
gvr03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
gvr00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
103602934 (KDM2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gvr03000
]
103602934 (KDM2B)
04121 Ubiquitin system [BR:
gvr04121
]
103602934 (KDM2B)
03036 Chromosome and associated proteins [BR:
gvr03036
]
103602934 (KDM2B)
Enzymes [BR:
gvr01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
103602934 (KDM2B)
Transcription factors [BR:
gvr03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
103602934 (KDM2B)
Ubiquitin system [BR:
gvr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
103602934 (KDM2B)
Chromosome and associated proteins [BR:
gvr03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
103602934 (KDM2B)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
103602934 (KDM2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
JHD
F-box
Cupin_8
JmjC
AppA_SCHIC
Motif
Other DBs
NCBI-GeneID:
103602934
NCBI-ProteinID:
XP_008585610
LinkDB
All DBs
Position
Unknown
AA seq
1251 aa
AA seq
DB search
MEGKDFNYEYVQREALRVPLIFREKDGLGIKMPDPDFTVRDVKLLVGSRRLVDVMDVNTQ
KGTEMSMSQFVRYYETPEAQRDKLYNVISLEFSHTKLEHLVKRPTVVDLVDWVDNMWPQH
LKEKQTEATNAIAEMKYPKVKKYCLMSVKGCFTDFHIDFGGTSVWYHVFRGGKIFWLIPP
TLHNLALYEEWVLSGKQSDIFLGDRVERCQRIELKQGYTFFIPSGWIHAVYTPVDSLVFG
GNILHSFNVPMQLRIYEIEDRTRVQPKFRYPFYYEMCWYVLERYVYCVTQRSYLTQEYQR
ESMLIDAPRKPSIDGFSSDSWLEMEEESCEQQPQEEEEEKEESGEGADKVPKPPAEGSAS
PTSTPSEDQEASGKKPKAPAMRFLKRTLSNESDESVKSTTMPADYPKTPTGSPATEVSAK
WTHLTEFELKGLKALVEKLESLPENKKCVPEGIEDPQALLEGVKNVLKEHADDDPSLAIT
GVPVVTWPKKTPKNRAVGRPKGKVGPASAVKLAANRTTAGARRRRTRCRKCEACLRTECG
ECHFCKDMKKFGGPGRMKQSCIMRQCIAPVLPHTAVCLVCGEAGKEDTVEEEEGKFNLML
MECSICNEIIHPGCLKIKESEGVVNDELPNCWECPKCNHAGKTGKQKRGPGFKYASNLPG
SLLKEPKMNRDNKEGQEPAKRRSECEEAPRRRSDEHPKKVPQDGILRRKSDDVHLRRKRK
YEKPQELSGRKRASTLQTSPGSSSHLSPRPPLGSSLSPWWRSSLTYFQQQLKPGKEDKLF
RKKRRSWKNAEDRMALSNKPLRRFKQEPEDDLPEAPPKTRESDHSRSSSPTAGPSTEGNE
GPEEKKKVKMRRKRRLPNKELSKELSKELNHEIQKTESSLANENHQPIKSEPESENEEPK
RPPGFCERPHRFSKGLNGTPRELRHQLGPGLRSPPRVISRPPPSVSPPKCIQMERHVIRP
PPISPPPDSLPLDDGAAHVMHREVWMAVFSYLSHQDLCVCMRVCRTWNRWCCDKRLWTRI
DLNHCKSITPLMLSGIIRRQPISLDLSWTNISKKQLSWLINRLPGLRDLVLSGCSWIAVS
ALCSSSCPLLRTLDVQWVEGLKDAQMRDLLSPPTDNRPGQMDNRSKLRNIVELRLAGLDI
TDASLRLIIRHMPLLSKLHLSYCNHVTDQSINLLTAVGTTTRDSLTEINLSDCNKVTDQC
LSFFKRCGNICHIDLRYCKQVTKEGCEQFIAEMSVSVQFGQVEEKLLQKLS
NT seq
3756 nt
NT seq
+upstream
nt +downstream
nt
atggagggcaaagatttcaactatgagtacgtacagagagaagctctcagggttcccctg
atatttcgagaaaaggatggactgggaattaagatgcccgaccctgatttcacagtacga
gatgtcaaactcctagtggggagccggcggctggtggatgtgatggacgtcaacacccag
aagggcacagagatgagcatgtcccagtttgtgcgctactacgagacgcctgaggcccag
cgggacaagctgtacaacgtcatcagccttgagttcagccacaccaagctggagcacctg
gtcaagcgtcccactgtggtagacctggtggactgggtggacaacatgtggccccagcac
ctgaaggagaagcagacagaagccacgaatgccatcgcagagatgaagtatccgaaagtg
aagaagtactgtctgatgagcgtgaaaggttgtttcactgacttccacatcgactttgga
ggcacttctgtttggtatcatgttttccggggtgggaagatcttttggctgatcccgcca
acgctgcacaatttggcactatacgaggagtgggtgctgtcaggcaaacagagtgacatc
tttctgggagaccgcgtggaacgatgccaaagaattgagctgaaacagggctacacgttt
ttcatcccttccggttggatccatgcagtctacacccctgtagactctctggtatttggt
ggaaacatcctgcacagctttaacgtgcccatgcagctgcggatctacgagatcgaggat
aggacacgggtgcagcccaaattccgttaccccttctactatgagatgtgctggtatgtg
ttggagagatacgtgtactgtgtgacccagcgctcctacctcactcaggaataccagaga
gagtcgatgcttattgatgccccaagaaagcccagcatagacggcttctcatctgattcc
tggctggagatggaggaggagtcctgtgagcagcagccccaggaggaagaggaggagaag
gaggagagtggggagggtgcagataaggtgcccaagccgcccgccgaaggctctgcctcg
cccaccagcaccccctccgaggaccaggaggcctctggaaagaagcccaaagcacctgcc
atgcggttcctcaaaaggactttgtcaaatgagtcggacgaaagcgtgaagtccacgaca
atgcccgcagattaccccaagacacccactggctctcccgccacggaggtctctgccaaa
tggacccaccttaccgagtttgaactgaagggcctgaaagctctggtggagaaactggaa
tccctcccagagaacaagaaatgtgtccccgagggcatcgaggacccccaggcactcctg
gaaggcgtgaagaatgtcctgaaggagcatgcagatgacgaccctagtctggccatcact
ggggtccccgtggtcacttggccaaagaagactccaaagaaccgggcggtgggtcggccc
aaggggaaggtgggcccggcctccgcggtgaagttggccgccaaccggacaacggcagga
gctcgccggcgcaggacgcgatgccgcaagtgcgaggcctgcctgcggaccgagtgtggg
gagtgccacttctgcaaggacatgaagaagttcgggggccccgggcggatgaagcagagc
tgcattatgcggcagtgcatcgctccagtgctgccccacaccgccgtgtgccttgtgtgt
ggcgaggcggggaaggaagacacggtggaagaggaagaaggcaagtttaacctcatgctc
atggagtgctccatctgcaacgaaatcatccaccctggatgccttaagattaaggagtca
gagggtgtggtcaacgatgagcttccaaactgctgggagtgtccaaagtgtaaccacgcc
ggcaagaccgggaaacaaaagcgtggccctggctttaagtacgcctccaacctgcctggc
tccctgctcaaggagccgaagatgaaccgggacaacaaggaaggtcaggagcctgccaag
cggaggagtgagtgtgaggaggcaccccgacgcaggtcagacgagcaccccaagaaggtg
ccccaggacggcatcctgcgccgaaagtctgacgacgtgcacctgaggaggaagcggaaa
tacgagaagccccaggaactgagtggacgcaaacgagcctcgacgcttcaaacgtccccc
ggttcctcctctcacctctcgccgaggccccctctaggcagcagcctcagcccctggtgg
agatccagtctcacttacttccagcagcagctaaaacctggcaaagaagataagcttttc
aggaaaaagcggcggtcctggaagaacgctgaggaccggatggcactgtccaacaagccc
ctccggcgcttcaagcaggagccagaggacgatctgcccgaggcgccccccaagaccagg
gagagcgaccactcacgctccagctcacccactgccgggcccagcaccgaggggaacgag
ggcccagaggagaagaagaaggtgaagatgcgccggaaacggaggcttcccaacaaggag
ctaagcaaggagctgagcaaggagctcaaccacgagatccagaagacggagagcagcctg
gccaatgagaaccaccagcccatcaagtcggagcccgagagtgagaatgaggagcccaag
cggcccccgggcttctgtgagcgcccccaccgcttcagcaagggcctcaatggcaccccc
cgcgagctgcggcaccagctggggcctggcctgcgcagcccaccccgtgtcatctcccgg
cccccgccctccgtgtccccgcccaagtgcatccagatggagcgccacgtgatccggccg
ccccccatcagccccccacccgactcgctgcccctggatgatggggcagcccatgtcatg
cacagggaggtgtggatggccgtcttcagctacctcagccaccaagacctatgtgtctgc
atgcgggtctgcaggacctggaaccgctggtgctgcgataagcggttgtggacccgcatt
gacctgaaccactgcaagtccatcacgcccctgatgctgagcggcatcatccgacgacag
cccatctccctcgacctcagctggaccaatatttccaagaaacagctgagctggcttatc
aaccggttgcctgggctccgggacttggtgctgtcgggctgctcgtggattgcagtctca
gccctctgtagctccagttgtccattgctccgaaccctggatgtccagtgggtagaagga
ttaaaggatgcccagatgagggatctcctgtccccgcccacagataacaggccaggtcag
atggacaatcggagcaagctccggaacattgtggagctgcgcctggcaggtctggacatc
acagacgcctccctgcggctcatcatccgccacatgcctctgctctccaagctccacctc
agttactgtaaccatgtcactgaccagtccatcaacctgctcactgctgtcggcaccacc
acccgagactccttaaccgagatcaacctgtcagactgcaataaggtcactgatcagtgc
ctgtccttcttcaaacgctgtggaaatatctgtcatattgacctgaggtactgcaagcaa
gtcaccaaggaaggctgtgagcagttcatagccgaaatgtctgtgagtgtccagtttgga
caagtggaagaaaaactcctgcaaaaactgagttag
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integrated database retrieval system
