Galeopterus variegatus (Sunda flying lemur): 103603408
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Entry
103603408 CDS
T08727
Symbol
DDX58
Name
(RefSeq) probable ATP-dependent RNA helicase DDX58
KO
K12646
ATP-dependent RNA helicase DDX58 [EC:
5.6.2.6
]
Organism
gvr
Galeopterus variegatus (Sunda flying lemur)
Pathway
gvr04064
NF-kappa B signaling pathway
gvr04622
RIG-I-like receptor signaling pathway
gvr04623
Cytosolic DNA-sensing pathway
gvr05160
Hepatitis C
gvr05161
Hepatitis B
gvr05162
Measles
gvr05164
Influenza A
gvr05168
Herpes simplex virus 1 infection
gvr05169
Epstein-Barr virus infection
gvr05171
Coronavirus disease - COVID-19
Brite
KEGG Orthology (KO) [BR:
gvr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
103603408 (DDX58)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
103603408 (DDX58)
04623 Cytosolic DNA-sensing pathway
103603408 (DDX58)
09160 Human Diseases
09172 Infectious disease: viral
05161 Hepatitis B
103603408 (DDX58)
05160 Hepatitis C
103603408 (DDX58)
05171 Coronavirus disease - COVID-19
103603408 (DDX58)
05164 Influenza A
103603408 (DDX58)
05162 Measles
103603408 (DDX58)
05168 Herpes simplex virus 1 infection
103603408 (DDX58)
05169 Epstein-Barr virus infection
103603408 (DDX58)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
gvr04054
]
103603408 (DDX58)
Enzymes [BR:
gvr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
103603408 (DDX58)
Pattern recognition receptors [BR:
gvr04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
103603408 (DDX58)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIG-I_C
CARD_2
RIG-I_C-RD
DEAD
ResIII
Helicase_C
AAA_25
CCDC85
Erythro_esteras
Motif
Other DBs
NCBI-GeneID:
103603408
NCBI-ProteinID:
XP_008586141
LinkDB
All DBs
Position
Unknown
AA seq
876 aa
AA seq
DB search
MEAATLFLKFLLELQEEGWFRGFLDALGQAGYSGLYEAIESWDFQKIEKLEEYRSLLKRL
QPEFKTSINPTSILPEISECLINQECEEIIQVCSNMGMMAGAEKMVECLLRSDKENWPKT
LKLALEKEESKFSELWTLEKGEKDVESKDLEDDEMETSDVQIFYQEDPEFQNLSQNSCPP
SEVSRNNLDRPLKARSYQLELALPAKEGKNTIICAPTGCGKTFVSLLICDHHLKKFPQGQ
NGKVVFFANQIPVYEQQKSAYSEYFERYGYRVAGISGATAENVPVAQIVENSDIIILTPQ
ILVNNLKNGTIPSLSVFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSDPLPQVVGLT
ASVGVGDAKNTDEAIDYICKLCASLDATVLATVKDNLEELEEIVYKPQKFFRKVESRTTD
KFKCIVSQLMRQTESMAKSIYEEFENLSQIRNREFGTQKYEQWIVAVQKACVVFQMQDKD
EESRICKALFLYTSHLRKYNDALIINEHARMKDALDYLKDFFSQVRAAGFNEIEQDLTRR
FDEKLQELESISVDPSNENPKLKDLCFILQEEYHLNPESRTILFVKTRALVDALKKWIEE
NSKLSFLKPGTLTGRGKTDQNIGMTLPAQKCVLDTFRTNGDNKILIATSVADEGIDIAQC
NLVILYEYVGNVIKMIQTRGRGRARGSKCILLTSNAYVIEKEKINMYKEKMMNDSILSLQ
RWDEEVFKEKILQIQMNEKFIRDSQEKAKPVLDKENKKLLCRKCKALACYTADIRVVEEC
HYTVIGDAFKECFVSKKHPKAKKFGNFEKRAKIYCAGQDCNHDWGIHVKYKAFEIPVIKI
ESFVVEDIATGIQTLYSKWKDFHFEKIPFDPAEMSR
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atggaggctgccacactttttctcaagttcctattggagctccaggaggaaggctggttc
cgtggctttttggatgccctaggccaagcaggttattctggactttatgaagccattgaa
agttgggatttccaaaaaattgaaaagttggaagaatataggtcacttttaaaacgttta
caaccagaatttaaaacaagcattaatccaacaagtattcttcctgaaatatctgaatgt
ttaattaatcaggaatgtgaagaaattatacaggtttgctccaatatggggatgatggca
ggtgcagagaagatggttgaatgccttctcagatcagacaaggagaactggcctaaaact
ttgaaacttgctttggagaaagaagagagcaagttcagtgaactgtggactttagagaaa
ggtgaaaaagatgttgaaagtaaagatcttgaggatgatgaaatggaaacttctgacgtg
cagattttctaccaggaagatccagaattccagaaccttagtcagaactcatgtccacct
tcagaagtgtctcgtaataacttggatagaccattgaaagcaagaagttatcaactagag
cttgctttgcctgctaaggaaggaaaaaacacaataatatgcgctcccactggttgtgga
aaaacctttgtttcacttcttatatgtgaccatcatcttaaaaaatttccacaaggacaa
aatgggaaggttgtcttttttgctaatcagatcccagtgtatgaacagcagaaatctgcg
tactcagaatattttgaacgatatgggtacagagttgcaggcatttctggagcgacagct
gagaatgtgccagtggcacaaattgttgagaacagtgacatcatcattttaactccacag
attcttgtgaacaaccttaaaaatggaactattccatcactgtctgtctttactttgatg
atatttgacgaatgccacaacaccagtaaacaacacccatataatatgatcatgttcaat
tatctagatcaaaaacttggaggatcttcagacccactgccccaggttgttgggctgact
gcctcagttggcgttggggatgccaaaaacacggatgaagccattgattatatctgcaag
ctgtgtgcttctcttgatgcaacagtgctagcaacagtcaaagacaacttggaggaactg
gaggaaattgtttataagccccagaagtttttcaggaaagtggaatcaaggactactgac
aaatttaagtgcatcgtatctcagttaatgaggcagacagagagtatggcaaagagtatc
tatgaagaatttgaaaacctgtctcaaattcgaaacagggaatttggaacacagaaatat
gaacagtggattgttgcagttcagaaagcgtgcgtggtgtttcagatgcaagacaaagac
gaagagagcaggatttgtaaagcgctgtttctgtacacttcacacttgcggaaatataat
gatgccctcattatcaatgagcacgcgcgaatgaaagatgccctggattacttgaaagac
ttcttcagccaagtccgagcagcaggatttaatgagattgagcaagatcttactcggaga
tttgatgaaaagctacaggaactagaaagtatttctgtggatcccagcaatgagaaccct
aaactcaaagacctctgtttcatcttgcaagaggagtaccacttaaacccagagtcaaga
accattctctttgtgaaaaccagagcacttgtggacgctttaaagaaatggattgaagaa
aattctaaactcagctttttaaaacctggcacattgactggacgtggcaaaacagatcag
aacataggaatgacactcccagcacagaagtgtgtattggacacgttcagaaccaatgga
gataacaagatcctgattgccacctcggttgctgatgaaggcattgacattgctcagtgc
aatctggtcatcctgtatgagtatgtgggcaacgtcatcaaaatgatccagaccagaggc
agaggaagagcaagaggtagcaagtgcattcttctgactagtaatgcttatgtaattgag
aaagaaaaaataaacatgtacaaagagaaaatgatgaacgactccattttaagccttcag
agatgggacgaagaagtatttaaagaaaagattctccaaatacagatgaatgaaaaattc
atcagagatagtcaagaaaaagcaaaacctgtacttgataaggaaaacaaaaaactgctc
tgcagaaagtgcaaagccttggcatgttatacagcagatataagagtggtggaggaatgc
cattacactgtgattggagatgcttttaaggagtgctttgtgagtaaaaaacaccccaag
gcaaagaaatttgggaattttgagaagagagcaaagatatactgtgccggacaggactgc
aaccatgactggggaatccatgtgaagtacaaggcttttgagattccagttataaaaatt
gaaagttttgtggtagaggatattgcaactgggattcagacactgtactcaaagtggaaa
gactttcattttgagaagataccgtttgatcctgcagaaatgtccagatga
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