Paenibacillus sp. Y412MC10: GYMC10_3943
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Entry
GYMC10_3943 CDS
T01100
Name
(GenBank) UDP-N-acetylmuramyl-tripeptide synthetase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
gym
Paenibacillus sp. Y412MC10
Pathway
gym00300
Lysine biosynthesis
gym00550
Peptidoglycan biosynthesis
gym01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gym00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
GYMC10_3943
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
GYMC10_3943
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gym01011
]
GYMC10_3943
Enzymes [BR:
gym01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
GYMC10_3943
Peptidoglycan biosynthesis and degradation proteins [BR:
gym01011
]
Precursor biosynthesis
Amino acid ligase
GYMC10_3943
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
ACX66172
UniProt:
D3E5D1
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All DBs
Position
complement(4517303..4518811)
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AA seq
502 aa
AA seq
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MILKSLTERLILKTITGSLSVDITNLDTDSREIRPGGMFVCVPGYHVDGHDYAEQAIRNG
AVAIVAERELSGLSENVTLITVPDTRRILPILANAFYGDPTQRLKLIGITGTNGKTTTTH
MVDKILNDARRKTGIIGTLYMKIGNHAEKTLNTTPDTIQLMRYFHTMISHGGEYGVLEVS
SHGLDMGRVRGCDFQTVVFTNLSHDHLDFHKTMESYRNTKELLFAQLGNSNRDMLKKAVL
NADDDASSYYAKRTSAQIITYGIQNQADVRATHIHHTREGCAFHAETPWGSSEVNLKVHG
AHNIYNALAAMTTCLLEGIPLEEIRESLGQFAGVHGRFQEIQTGRRFGVVVDYAHNPDGL
KATLQSAKAITSGKMICVMGCRGERDRSKRPIMADIASSYADYVLFTADNPFSEDPEQIM
AEMLGGLTSRESGNWEVVLDRKEAIQRAVEMAGDEDRIIITGRGHETRYVTGSRIESFSD
EDIVMSSLQGIEQDILMMTPEP
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgattctaaaatcactgacggagcggttgatccttaagacgattacgggcagtctttcc
gtggatatcacgaacctggatacagattcaagagaaatccggccaggcggcatgttcgtc
tgcgttccgggatatcacgtggacggccacgattacgccgagcaggcgatacgaaacggg
gctgtagccatcgtggccgagcgggagctttcgggactgtctgaaaacgtaacactgata
accgtaccggacaccagaagaatcctgccgattctcgcaaacgctttttatggcgatcct
acgcagcgtttgaaattgatcgggattaccgggacgaacggcaagacaacgacgacccat
atggtagataaaatacttaacgacgcccgccgcaaaacagggatcatcggcaccttgtat
atgaaaatcggaaatcatgcggagaagacgctgaatacaacgccggatacgatccaactt
atgcgttattttcatacgatgatctcgcatggcggagaatacggtgttctggaggtatct
tcgcacggattggatatgggcagggtccgcggatgcgattttcagaccgtcgtcttcacg
aatttatcgcatgatcatctggatttccataagacaatggagagctatcgcaatacgaag
gagctgctgttcgcccaactgggcaacagtaaccgtgacatgctgaagaaggccgtcttg
aacgctgacgatgatgcatcctcttattacgctaaacgcacatccgctcagatcataacc
tatggcattcagaatcaggcggatgtccgggcaacgcacattcatcacacaagggaaggc
tgcgcctttcatgcagaaacgccttggggaagcagcgaagttaatctgaaggtgcatgga
gcacacaacatttacaacgcgctggccgccatgacgacctgcctgctggaagggataccg
ctggaagaaatccgcgaaagtttgggacaatttgcaggggttcatggccggtttcaagaa
atacaaacaggacgccgttttggcgtggtggtcgattatgcgcataatccggacggtctt
aaggcaaccttgcaatccgccaaggccattacttcaggcaaaatgatatgcgtgatgggc
tgccggggcgagcgggaccgatcgaaacggccgatcatggccgatattgcatcttcgtat
gcggattatgtattgttcacggccgacaatccgttttcggaggatccggagcagatcatg
gccgagatgctgggcggcttaacttcccgcgaatcgggaaactgggaggttgtcttagat
cgcaaagaagcgattcaacgcgcagtggaaatggccggtgacgaggacaggattattata
accggacgagggcacgaaacccgttatgttacgggcagccggatcgaatcgtttagcgat
gaggatatcgtgatgagttctttgcagggcatagagcaggacatcctgatgatgacaccg
gaaccctaa
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