Geobacillus zalihae: IC807_15045
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Entry
IC807_15045 CDS
T07057
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
gza
Geobacillus zalihae
Pathway
gza03030
DNA replication
gza03410
Base excision repair
gza03420
Nucleotide excision repair
gza03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gza00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IC807_15045 (ligA)
03410 Base excision repair
IC807_15045 (ligA)
03420 Nucleotide excision repair
IC807_15045 (ligA)
03430 Mismatch repair
IC807_15045 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gza03032
]
IC807_15045 (ligA)
03400 DNA repair and recombination proteins [BR:
gza03400
]
IC807_15045 (ligA)
Enzymes [BR:
gza01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
IC807_15045 (ligA)
DNA replication proteins [BR:
gza03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
IC807_15045 (ligA)
DNA repair and recombination proteins [BR:
gza03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
IC807_15045 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
IC807_15045 (ligA)
MMR (mismatch excision repair)
DNA ligase
IC807_15045 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
IC807_15045 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
HHH_5
DNA_ligase_ZBD
HHH
Nlig-Ia
PTCB-BRCT
RNA_pol_A_CTD
HHH_3
BRCT_2
HHH_8
Motif
Other DBs
NCBI-ProteinID:
QNU17664
UniProt:
A0A1V9C393
LinkDB
All DBs
Position
2988418..2990430
Genome browser
AA seq
670 aa
AA seq
DB search
MDRQQAERRAAELRELLHRYGYEYYVLDRPSVPDAEYDRLMQELMAIEEQYPELKTSDSP
TQRIGGPPLEAFRKVTHVVPMMSLANAFGEGDLRDFDRRIRQEVGEAAYVCELKIDGLAV
SVRYEDGYFVQGATRGDGTTGEDITENLKTIRSLPLRLKEPVSLEARGEAFMPKASFLRL
NEERKARGEELFANPRNAAAGSLRQLDPKVAASRQLDLFVYGLANAEELGIESHSEALDY
LQALGFKVNPERRRCANIDEVIAFVNEWHEKRPQLPYEIDGIVIKVDSFAQQRELGTTAK
SPRWAIAYKFPAEEVVTTLIGIEVNVGRTGVVTPTAILEPVRVAGTTVQRATLHNEDFIR
EKDIRIGDAVIIKKAGDIIPEVVGVVVDRRDGDETPFVMPTHCPECESELVRLDGEVALR
CLNPKCPAQLRERLIHFASRAAMNIEGLGEKVVTQLFNAGLVHDVADLYCLTKEQLISLE
RMGEKSATNLLAAIEASKQNSLERLLFGLGIRYVGAKAAQLLAEHFETMERLEKATKEEL
MAVPEIGEKMADSIIAFFSQPEAAELLHELRLYGVNMAYKGPKRAAEAPADSAFAGKTVV
LTGKLASMSRNEAKEEIERLGGRVTGSVSRSTDIVIAGEDAGSKLEKAQQLGIEIWDESR
FLQEINRGKR
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggaccgccaacaagccgaacggcgcgcggccgagctgcgcgaactgttgcaccgctat
ggctacgaatattatgtgctcgaccggccgtccgtcccggacgccgagtatgaccggctc
atgcaagagttgatggccatcgaggaacagtatccggaattgaaaacgagcgactcgccg
acccagcgcatcggcggcccgccgcttgaggcgtttcgcaaagtgacgcatgttgttccc
atgatgagtctcgcgaacgcgtttggcgaaggcgacttgcgcgattttgaccgccgcatc
cgccaggaagtcggcgaagcagcgtacgtatgcgagttgaaaatcgacggcctcgccgtc
tcggtccgctatgaagatggttatttcgtgcaaggagcgacgcgcggcgacggaacgacg
ggcgaggacattacagaaaatttgaaaacgatccgctcgctgcctctccgcctgaaagaa
ccggtgtcgcttgaggcgcgcggcgaagcgtttatgccgaaagcgtcgtttttgcgcttg
aatgaggagcgaaaagcccgcggcgaggagctgtttgccaacccgcgcaacgcggcggcc
ggctcgctccgccagctcgacccgaaagtggcggcgtcgcgccagctcgatttgttcgtt
tatggtttggccaatgctgaagagcttggcattgagtcgcacagcgaggcgctcgactac
ttacaggcgcttgggtttaaagtgaatcccgagcggcggcgctgcgccaacatcgatgag
gtgatcgccttcgtcaacgagtggcacgaaaaacggccgcagctgccgtacgaaatcgac
ggcatcgtcattaaagtcgactcgttcgcccaacagcgggagcttggtacgacggcaaaa
agcccgcgctgggcgatcgcctacaaattcccagccgaggaagtggtgacgacgctcatc
ggcattgaggtgaacgtcggccgcacgggcgtcgtcacgccgaccgcgatcttagagccg
gtccgcgtcgctggcacgaccgtgcagcgcgccactcttcataatgaagattttatacgg
gaaaaagacattcgcatcggcgatgcggtcatcattaaaaaagcgggcgacatcatcccg
gaagtggtcggcgtcgtcgtcgaccggcgcgacggggatgaaacgccgtttgtcatgccg
acgcattgtccggaatgcgaaagcgagctcgtccgcctggatggagaagtggcgctccgt
tgcttaaacccgaaatgcccggcccagctgcgcgaacggctcatccattttgcttcaaga
gcagcgatgaacattgaagggttgggcgaaaaagtcgtcacccaactgtttaacgctggc
ctcgtccacgatgtcgccgatttgtactgcttgacgaaagaacagctcatcagtttggaa
cggatgggcgaaaagtcagcaaccaacttgcttgcagcgattgaggcatcgaagcaaaac
tcgctcgagcggttgctgttcggtcttggcatccgctatgttggagcgaaggcggcccaa
cttttggctgagcattttgaaacgatggagcggctggaaaaagcgacgaaagaggaattg
atggccgtgccggaaattggcgagaaaatggcggactcgatcatcgccttcttttcccag
ccagaagcggccgagctgctccatgagctgcggctttacggcgtcaacatggcatacaaa
gggccgaagcgggcggctgaagcgcctgctgactccgccttcgccggcaaaacggtcgtc
ttgaccggcaaactcgcgtcgatgtcgcgcaatgaggcaaaagaagagattgaacggctc
ggcgggcgcgtcaccggcagcgtcagccgcagcaccgacatcgtcatcgccggtgaggac
gccggatcgaagctggagaaagcccagcagcttggcattgagatttgggacgaatcacga
tttttgcaagagatcaacagggggaaacgatga
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integrated database retrieval system
