Halalkaliarchaeum sp. AArc-CO: AArcCO_1816
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Entry
AArcCO_1816 CDS
T09489
Symbol
nth2
Name
(GenBank) EndoIII-related endonuclease
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
haaa
Halalkaliarchaeum sp. AArc-CO
Pathway
haaa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
haaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AArcCO_1816 (nth2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
haaa03400
]
AArcCO_1816 (nth2)
Enzymes [BR:
haaa01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
AArcCO_1816 (nth2)
DNA repair and recombination proteins [BR:
haaa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AArcCO_1816 (nth2)
Prokaryotic type
AArcCO_1816 (nth2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
HHH_5
Ogg-HhH
HPD
HHH_8
DUF4276
Motif
Other DBs
NCBI-ProteinID:
UWG51115
LinkDB
All DBs
Position
1804933..1805619
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AA seq
228 aa
AA seq
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MGTPLDEREEQVTAVLDRLFDAYPDSTISLNYSSRFELLVAVVLSAQCTDERVNATTAEL
FEEYESPEDFANVSQDELAERLNSITYYNNKAGYLRSAAQDIVEKHDGEVPDTMSELTEL
AGVGRKTANVVLQHGHDVVEGIVVDTHVQRLSRRLGLTDEQRPEAIEDDLMDVVPKENWQ
QFTHLFIDHGRATCTARNPDCEDCVLEDLCPSSKLDNGVDLASGEEWS
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgggaaccccgctggacgagcgagaagaacaggtgacggcagtgcttgacaggttgttc
gacgcgtatcctgactcgacgatctcgttgaactactcgagtcggttcgagctcctcgtt
gcggtggtgctttcggcgcagtgtaccgacgagcgggtgaacgcgacgactgcggaactg
ttcgaggagtacgagtcgcccgaggacttcgcgaatgtatcgcaggacgaactggccgag
cgactgaactcgattacgtactacaacaacaaggcggggtatctgcgatctgcagcccaa
gacatcgtcgagaaacacgacggcgaggtccccgatacgatgtcggagctcacggagctg
gccggcgtcggtcggaagactgcaaacgtggtcctccagcacggtcacgacgtcgttgag
ggaatcgtcgtcgacacccacgtccagcgactctcgcggcgtctcgggttgacggacgaa
cagcgtccggaggcgattgaggacgacctgatggacgtcgtcccgaaagagaactggcag
cagttcacacacctcttcatcgaccacggtcgggcgacctgtacggcccggaatcccgac
tgcgaggactgcgtgctggaagatctctgtccgtcctcgaaactggacaacggagtcgat
ctcgcctctggcgaagagtggtcgtag
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integrated database retrieval system
