Halomonas sp. BDJS001: OM794_09720
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Entry
OM794_09720 CDS
T10426
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
habd Halomonas sp. BDJS001
Pathway
habd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
habd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
OM794_09720 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
habd03400
]
OM794_09720 (nth)
Enzymes [BR:
habd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
OM794_09720 (nth)
DNA repair and recombination proteins [BR:
habd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
OM794_09720 (nth)
Prokaryotic type
OM794_09720 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
Ogg-HhH
Motif
Other DBs
NCBI-ProteinID:
UZH11989
LinkDB
All DBs
Position
complement(2134027..2134665)
Genome browser
AA seq
212 aa
AA seq
DB search
MNAQKRHEIFTRLQAENPHPTTELNWSTPFELLAAVLLSAQATDVGVNKATARLYPVANT
PQEIIELGIDELKAHIKTIGLYNTKAENLMKTCHILVNQHGGEVPNTREALEALPGVGRK
TANVILNTAFGQPTMAVDTHIFRVSNRTGIAKGKNVVEVEQKLLRHVPKGFLHDAHHWLI
LHGRYTCIARKPRCGSCIIEDLCEFKDKTEIA
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcccaaaagcgtcatgagattttcactcgcctgcaggcggagaatccacacccc
actactgagcttaattggagcacgccgtttgagctgcttgccgccgtgctgctttctgca
caagccaccgatgtgggggtcaataaagccacggcgcgactttatccagtcgccaacacc
ccccaagagatcattgagttaggtatcgatgaactaaaagcgcacatcaaaaccatcggt
ttgtataacaccaaagccgaaaacctgatgaaaacctgccacatcctggtcaaccagcac
ggcggcgaagtgcccaatactcgcgaagccttggaggccctgcctggcgtcggccgtaaa
accgccaatgtgatactcaacaccgcctttggccaacccaccatggcggtggatacccat
attttccgggtctccaaccgcaccggcattgctaaaggcaaaaatgtcgttgaggtggag
caaaaactactgcgccatgtgccaaaaggatttcttcacgatgctcaccattggttgatt
cttcacggccgctacacctgcatcgcgcgcaaacctcgctgcggtagctgtattattgag
gatctgtgcgagtttaaagacaaaactgagattgcttaa
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