Halomonas sp. BDJS001: OM794_16290
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Entry
OM794_16290 CDS
T10426
Name
(GenBank) TraR/DksA family transcriptional regulator
KO
K06204
RNA polymerase-binding transcription factor
Organism
habd Halomonas sp. BDJS001
Brite
KEGG Orthology (KO) [BR:
habd00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02026 Biofilm formation - Escherichia coli
OM794_16290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
habd03000
]
OM794_16290
03021 Transcription machinery [BR:
habd03021
]
OM794_16290
03009 Ribosome biogenesis [BR:
habd03009
]
OM794_16290
Transcription factors [BR:
habd03000
]
Prokaryotic type
Other transcription factors
Others
OM794_16290
Transcription machinery [BR:
habd03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription elongation factors
OM794_16290
Ribosome biogenesis [BR:
habd03009
]
Prokaryotic type
rRNA transcription factors
OM794_16290
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-dskA_traR
Phage_P1_RepL
Motif
Other DBs
NCBI-ProteinID:
UZH08900
LinkDB
All DBs
Position
complement(3498565..3498906)
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AA seq
113 aa
AA seq
DB search
MNHPEVDIVVIREQLLALDATLREESASSEASRDTVMLDQTSVGRLSRMDAMQGQAMAKA
GEQRRQLKLKQIAAALQRIEGESFGECVECGEWIGAKRLTWDPLVLKCIECAD
NT seq
342 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaccctgaggtggatatagtcgttatccgtgagcaattgctggctcttgacgcc
acgctccgcgaggagagcgccagcagtgaagcgtcccgtgatacggtgatgctggatcaa
acatcggtgggtcggctgtcgcgaatggatgcgatgcaagggcaggcgatggctaaagca
ggcgagcagcgccgtcagctaaagctaaagcagattgctgctgccctgcaacgtattgaa
ggggaaagcttcggtgagtgtgtcgagtgcggcgaatggattggggccaaacgcctcacc
tgggatccgttagtgctgaagtgtattgagtgtgccgattag
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