Halorhabdus sp. BNX81: HBNXHr_1862
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Entry
HBNXHr_1862 CDS
T09448
Symbol
nth2
Name
(GenBank) Endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
habn
Halorhabdus sp. BNX81
Pathway
habn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
habn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HBNXHr_1862 (nth2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
habn03400
]
HBNXHr_1862 (nth2)
Enzymes [BR:
habn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
HBNXHr_1862 (nth2)
DNA repair and recombination proteins [BR:
habn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HBNXHr_1862 (nth2)
Prokaryotic type
HBNXHr_1862 (nth2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
EndIII_4Fe-2S
DUF5361
HHH
HHH_5
TetR_C_36
Motif
Other DBs
NCBI-ProteinID:
WEL21918
LinkDB
All DBs
Position
1867278..1868138
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AA seq
286 aa
AA seq
DB search
MRSFLTLREPRRTMSEDAEPVENISGGPGSGGSMDTFEPSENETRAAKVVDRLGELYWQK
TYGGQDAFECLVRTILSQNTSDVASQPAHDALMDRYGSEEDEVDLVDALADAEQAELAET
ISGAGLHNQKSARIIEIAERVREEYGGEDDFDAFVREEPAEAVRETLLAMNGVGPKTADC
VLLFAGGRDGVFPVDTHVYRIYRRLGIAPPDADHEAVREVLEEKVPKGKCGFGHTASIQF
GREYCSARKPACLDGPEACPLYDLCDRVGVEPASGDVVDPAETVGS
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgcggtcgtttttgacgctgcgcgaaccaagacgaaccatgagcgaggacgccgaaccg
gtcgagaacatcagcggtggccccggcagcggcggctcgatggataccttcgagccgagc
gaaaatgagacgcgggctgccaaggtggtcgaccgcctgggcgaactgtactggcagaag
acctacggcggccaggacgccttcgagtgtctcgtccggacgatcctcagccagaacacg
agcgacgtggcgagccagccggcccacgacgcgttgatggaccgatacggatccgaggag
gacgaagtcgatctcgtcgacgccctcgccgacgccgaacaggccgaactcgcagagacg
atctccggggccggcctccacaaccagaagtccgcccggatcatcgagatcgccgagcgc
gtccgcgaggagtacggcggcgaggacgacttcgacgcgttcgtccgcgaggagcccgcc
gaggcagttcgggaaacgctgctcgcgatgaacggcgtcggccccaagaccgccgactgt
gtcctcctctttgctggtggacgcgacggcgtctttccggtcgacacgcacgtctaccgg
atctaccgccgcctcggtatcgccccgccggacgccgaccacgaggcagtccgcgaggtg
ctcgaagagaaagtgcccaaggggaaatgtggcttcggtcacaccgcgagcatccagttc
ggccgggagtactgcagcgcgcgcaagccggcgtgtctcgacggtcccgaggcatgcccg
ctgtacgatctctgtgatcgcgtcggtgtcgagccagcgagcggcgatgtcgtcgatccg
gccgagacagtcggaagctga
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