Halobacterium sp. BOL4-2: JRZ79_02250
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Entry
JRZ79_02250 CDS
T07284
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
habo
Halobacterium sp. BOL4-2
Pathway
habo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
habo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JRZ79_02250 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
habo03400
]
JRZ79_02250 (nth)
Enzymes [BR:
habo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
JRZ79_02250 (nth)
DNA repair and recombination proteins [BR:
habo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
JRZ79_02250 (nth)
Prokaryotic type
JRZ79_02250 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
HHH_5
DUF2400
Motif
Other DBs
NCBI-ProteinID:
QRY25246
UniProt:
A0A895AB83
LinkDB
All DBs
Position
complement(432507..433190)
Genome browser
AA seq
227 aa
AA seq
DB search
MGTRLETRSAQVETVIDRLREQHPDPEISLRFSSRMELLVAVILSAQCTDERVNAETEHL
FDTYETVADYANADEEALAAELNSITYYNSKAGYIKSAAQSILEDHDGAVPDTMSDLTDL
SGVGRKTANVVLQHGHDLTQGIVVDTHVQRLSRRLGITEKKRPEAIETDLMPVVPENHWK
NYTHWLIAHGRETCTARNPDCGACVLADICPSSKTDHDIDLADGSEW
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgggcacgcgactggagacgcgaagcgcgcaggtcgagaccgtcatcgaccggctgcgc
gagcaacaccccgacccggagatctcgctgcggttctcctcacgcatggagctgctcgtg
gcggtgatcctgtccgcacagtgcactgacgagcgcgtcaacgccgaaaccgagcacctc
ttcgacacctacgagaccgtcgcggactacgcgaacgccgacgaggaagcgctggctgcg
gaactgaactcgatcacgtactacaacagcaaggccggatacatcaaaagcgccgcacag
tcgatcctcgaagaccacgacggcgcagtacccgacaccatgagcgacctcacggacctc
tcgggggtcggtcggaagacggccaacgtcgtcctccagcacggccacgacctgacccag
ggcatcgtcgtggacacccacgtgcagcggctgtcgcggcgcctcgggatcaccgagaaa
aagcgcccggaagccatcgaaaccgacctgatgccggtcgtgcccgagaaccactggaag
aactacacgcactggttgatcgcgcacggccgagagacgtgtacggcccggaacccggac
tgcggggcgtgcgtgcttgcggacatctgcccgtcgtcgaagaccgaccacgacatcgac
ttggccgacggcagcgagtggtga
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