Halobaculum sp. CBA1158: Hbl1158_05685
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Entry
Hbl1158_05685 CDS
T08013
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
hacb
Halobaculum sp. CBA1158
Pathway
hacb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hacb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Hbl1158_05685 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hacb03400
]
Hbl1158_05685 (nth)
Enzymes [BR:
hacb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Hbl1158_05685 (nth)
DNA repair and recombination proteins [BR:
hacb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Hbl1158_05685 (nth)
Prokaryotic type
Hbl1158_05685 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
IMS_HHH
HHH_8
Motif
Other DBs
NCBI-ProteinID:
UIP00847
LinkDB
All DBs
Position
1077190..1077873
Genome browser
AA seq
227 aa
AA seq
DB search
MGTPLDSREAQVAEVLDRLYEEYPDTDISLNFSTELELLVAVVLSAQCTDERVNDVCEDL
FGKYRSAQDYAEASEDELADDIYGITYHNSKAGYLKGIGETLVAEHDGEVPDTMSALRDL
PGVGRKTANVVLQHAHDVTEGIVVDTHVQRISRRLGLTTEERPEAIESDLMAVVPEDDWR
MFTHLFISHGRATCTAQNPECDDCVLADVCPSERGDAAVDLASDEAW
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgggaacgccgctcgactcgcgcgaggcgcaggtcgcggaggtgctcgacaggctctac
gaggagtaccccgacacggacatctcgctgaacttctcgacggaactggagctgctggtc
gcggtcgtcctctcggctcaatgtaccgacgaacgcgtcaacgacgtgtgcgaggacctc
tttgggaagtaccggtccgcgcaggactacgccgaggccagcgaggacgaactcgccgac
gacatctacgggatcacctaccacaacagcaaggcggggtacctgaagggtatcggcgag
accctcgtcgccgagcacgacggggaggtgcccgacaccatgtcggcgctgcgggacctc
ccgggcgtcggccgcaagacggcgaacgtggtgcttcagcacgcccacgacgtgaccgaa
gggatcgtcgtcgacacgcacgtccagcgcatctcgcggcggctcggactcaccaccgag
gagcgccccgaggcgatcgagtccgacctgatggccgtcgtccccgaggacgactggcgg
atgttcacccacctgttcatcagccacggtcgagcgacgtgcacggcccagaacccggag
tgcgacgactgcgtgctcgcggacgtctgtccgtccgaacgcggcgacgccgccgtcgat
cttgccagcgacgaggcgtggtga
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