Halomonas sp. DN3: NKF27_10765
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Entry
NKF27_10765 CDS
T10930
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
hadn Halomonas sp. DN3
Pathway
hadn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hadn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NKF27_10765 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hadn03400
]
NKF27_10765 (nth)
Enzymes [BR:
hadn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
NKF27_10765 (nth)
DNA repair and recombination proteins [BR:
hadn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NKF27_10765 (nth)
Prokaryotic type
NKF27_10765 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_8
HHH_5
Motif
Other DBs
NCBI-ProteinID:
USZ48015
LinkDB
All DBs
Position
2503387..2504022
Genome browser
AA seq
211 aa
AA seq
DB search
MNAAKRHEIFTRLRAHNPEPTTELNWSTPFELLAAVLLSAQATDVGVNKATARLFPVANT
PQAIIDIGIDALKEHIKTIGLYNTKAENLMKTCHLLIENHGGEVPATRPALEALPGVGRK
TANVILNTAFGQPTIAVDTHIFRVSNRTGIAKGKNVVEVEERLVRHVPREFRQDAHHWLI
LHGRYTCVARKPRCGSCVIEDLCEFKDKTDI
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgaacgctgccaaacgccacgagatctttacccgcctgcgggcccacaatcccgagccg
accaccgagctcaactggagcacaccgtttgaactgctggccgcggtactgctgtcggcg
caggccaccgacgtcggcgtcaacaaggccaccgctcgcctgttccccgtggccaacaca
ccccaggcgatcatcgatatcgggatcgacgcgctcaaggaacacatcaagaccatcggc
ctttacaacaccaaggccgaaaacctgatgaagacctgccatctgctgatcgagaaccat
ggcggcgaggtaccggccacccgtccggcgctggaggccctgcccggggtcggacgcaag
accgccaacgtgatactcaacaccgccttcggccagcccaccatcgccgtggacacccac
atcttccgggtctccaaccgcaccggcatcgccaagggcaagaacgtggtggaggtcgag
gaacggctggtgcgccacgtgccccgcgagtttcgccaggacgcccaccactggttgatc
ctccatggccgctatacctgcgtggcgcgcaagccacgttgcggcagctgtgtcatcgag
gatctgtgcgagttcaaggacaagaccgacatctag
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