Haloplanus aerogenes: DU502_06540
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Entry
DU502_06540 CDS
T05732
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
haer
Haloplanus aerogenes
Pathway
haer03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
haer00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DU502_06540 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
haer03400
]
DU502_06540 (nth)
Enzymes [BR:
haer01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
DU502_06540 (nth)
DNA repair and recombination proteins [BR:
haer03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DU502_06540 (nth)
Prokaryotic type
DU502_06540 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
HHH_5
EndIII_4Fe-2S
Ribosomal_S13
DUF6874
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
AZH25051
UniProt:
A0A3M0CZN1
LinkDB
All DBs
Position
complement(1293218..1293904)
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AA seq
228 aa
AA seq
DB search
MGTPLDSRERQVEEVLDRLYEEYPDATISLNYSNRLELLVAVVLSAQCTDERVNEVTADL
FEKYTSAEDYADADEAELAEDIYGITFHNNKAGYLKSMGETLVEEHGGEVPDTMSALTDL
SGVGRKTANVVLQHGHDVVEGIVVDTHVQRLSRRLGLTTEETPEKIEDDLMDVVPEDDWQ
QLTHLLISHGRAVCDARTPDCDACVLEDICPSSKLDSETDLASGEAWG
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgggcacgccactggactcccgggaacgccaggtcgaggaagtgctggatcggctgtac
gaggagtatcccgacgcgaccatctcgctcaactactcgaatcggctggaactgctcgtc
gccgtcgtcctctcggcgcagtgtaccgacgagcgcgtcaacgaggtgacggccgacctc
ttcgagaagtacacgtccgccgaggactacgccgacgccgacgaggcggaactcgccgag
gacatctacggcatcaccttccacaacaacaaagcgggctacctgaaatccatgggcgag
acgctcgtcgaggaacacggcggcgaggtgcccgacaccatgtcggcgctcaccgacctc
tcgggggtcgggcgcaagacggcgaacgtcgtcctccagcacggccacgacgtggtggaa
ggaatcgtcgtcgacacgcacgtccagcgactttcgcggcgcctcggcctcacgaccgag
gagacgcccgagaagatcgaagacgacctgatggacgtggtgcccgaggacgactggcaa
cagctcacccacctgctcatcagccacgggcgcgcggtgtgtgacgcccggacccccgac
tgtgacgcgtgcgtcctcgaagatatctgtccctcgtcgaaactggattcagagacggat
ctggcgagcggcgaggcgtggggttag
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integrated database retrieval system
