Haloplanus aerogenes: DU502_07515
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Entry
DU502_07515 CDS
T05732
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
haer
Haloplanus aerogenes
Pathway
haer03030
DNA replication
haer03410
Base excision repair
haer03420
Nucleotide excision repair
haer03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
haer00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DU502_07515 (ligA)
03410 Base excision repair
DU502_07515 (ligA)
03420 Nucleotide excision repair
DU502_07515 (ligA)
03430 Mismatch repair
DU502_07515 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
haer03032
]
DU502_07515 (ligA)
03400 DNA repair and recombination proteins [BR:
haer03400
]
DU502_07515 (ligA)
Enzymes [BR:
haer01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
DU502_07515 (ligA)
DNA replication proteins [BR:
haer03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
DU502_07515 (ligA)
DNA repair and recombination proteins [BR:
haer03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
DU502_07515 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DU502_07515 (ligA)
MMR (mismatch excision repair)
DNA ligase
DU502_07515 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
DU502_07515 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
HHH_2
HHH_5
BRCT
HHH
DNA_ligase_ZBD
Nlig-Ia
HGD-D
BRCT_2
HHH_3
DZR_2
Motif
Other DBs
NCBI-ProteinID:
AZH27175
UniProt:
A0A3G8QY32
LinkDB
All DBs
Position
complement(1475218..1477254)
Genome browser
AA seq
678 aa
AA seq
DB search
MVEEPADNPYVRDPDTSFAPVDELNEDEAREQVADLRAAIEYHDYRYYVENDPVIADRAY
DELFERLQALEDAFDLHDENSPTQRVGGEPLDELETVEHVVPLLSLQSSGEVDEIREFDR
RICDRVGEVNYSAEPKFDGFSVEVVYEDGAFDRAVTRGDGQRGEDVSANVRTIRSVPLHL
PDDAPDFLAVRGEVYMPRSGFQELNERRIERGDDPFANPRNAAAGTVRLLDPETVADRPL
DVFFYDVIDTSADLDAQTEAFDLLRDLGFRVNDETTVVDDVDAVIDYRNRLMDERDDLEY
EIDGIVAKVVDFDAREELGSTARHPRWAFAYKFPARTGETTVERIIVQVGRTGKLTPVAL
LDPVDVQGVTISRATLHNASQIERLGVREGASVRLERAGDVIPEVVEVTEGGNGYFEMPD
ACPVCDGNVAQEGEHHYCTNASCPAQLRRSLQHFCSRDAMDIEGLGAEAADQLVEAGLIE
SLADLYDLDRDSLVALDGWGERSADNLLAELEASKHVALGTFIYALGIRHVGTERARALA
AAFSLDELLDATVEDLRAVDDVGPEVAEAVVDYFDSEANVEMVERLLDAGVEPERQERGD
ELDGLTVVFTGSVPGYTRSELTELLETHGANVTSSVSGETDYLVVGENPGTRKREQAEAE
GVKTLDPTAFEERILSRV
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggtcgaggaaccagcggacaacccgtacgtgcgcgacccggacacgtcgttcgcgccg
gtcgacgaactgaacgaggacgaggcccgcgagcaggttgccgacctgcgcgcagccatc
gagtaccacgactaccgctactacgtcgagaacgaccccgtgatcgccgaccgtgcctac
gacgaactgttcgagcgcctgcaggcgttagaggacgcgttcgacttacacgacgaaaac
tcgccgacccagcgtgtcggcggcgaaccgctggacgagttggagacggtcgaacacgtc
gtgcccctcctgagcctgcagtcgtcgggcgaggtggacgaaatccgcgagttcgaccgg
cggatctgtgaccgcgtgggcgaggtgaactactccgcggagccgaagttcgacggcttc
tccgtcgaggtggtgtacgaggacggcgccttcgaccgcgccgtcacccgtggcgacggc
caacggggcgaggacgtatctgcgaacgtccgcaccatccgcagcgtccccctccacctc
cccgacgacgctcccgacttcctcgccgtccgcggcgaggtgtacatgccccgttcgggc
tttcaggaactgaacgagcgccggatcgaacgcggcgacgaccccttcgccaacccgcgc
aacgccgcggcggggacggtccgcctcctcgaccccgagacggtcgcggatcgcccgctc
gacgtgttcttctacgacgtgatcgacacctcggccgacctcgacgcccagacggaagcg
ttcgacctgctccgcgacctcggcttccgcgtcaacgacgagacgaccgtcgtcgacgac
gtggacgccgtgatcgactaccgcaaccggctcatggacgagcgcgacgacctggagtac
gaaatcgacggcatcgtcgccaaggtggtcgacttcgacgctcgcgaggaactggggtcg
accgcgcgccaccctcgctgggccttcgcctacaagttccctgcgcggaccggcgagacg
accgtcgagcgcatcatcgtacaggttggacggacggggaagctgacgccggtcgccctc
ctcgaccccgtggacgtacagggcgtgacgatcagtcgtgccaccctccacaacgcctcg
cagatcgagaggctgggggtacgggagggtgcgagcgtccgcctcgaacgcgcgggcgac
gtgatccccgaggtggtcgaggtgacggagggtggcaacggctacttcgagatgccggac
gcctgccccgtctgtgacggcaacgtcgcccaagagggcgaacaccactactgcacgaac
gcgtcgtgtcccgcccaactgcgccgctccctccagcatttctgctcgcgcgacgcgatg
gacatcgagggtctgggtgcggaggcggccgaccagctagtcgaggcggggctgatcgag
tcgctcgccgacctctacgacctcgatcgtgacagcctcgtggcgctggacgggtggggc
gagagatcggccgacaacctgctcgccgaactggaggcgagcaagcacgtggctctgggc
acgtttatctacgcgctcggcatccggcacgtcgggacggaacgggcgcgagcgctcgcc
gccgcgttctcgctcgacgagttgctggacgcgaccgtcgaggacctccgcgccgtcgac
gacgtggggccggaggtagcggaggccgtcgtcgactacttcgactccgaggcgaacgtc
gagatggtggagcgcctcctcgacgcgggtgtcgaacccgaacggcaggagcgcggcgac
gaactggacgggctgacggtggtgttcaccgggagcgtgccgggctacacccggtcggag
ctgacggagttgctggagacccacggcgcgaacgtcacctcctcggtcagcggcgaaacg
gactacctcgtggtcggtgagaatccggggacgcggaagcgagagcaagcggaggcagaa
ggggtgaagacgctcgatccgacggcgttcgaggagcggattctgtcgcgggtgtag
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