Halomonas sp. SF2003: C8233_07470
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Entry
C8233_07470 CDS
T05423
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
haf
Halomonas sp. SF2003
Pathway
haf00300
Lysine biosynthesis
haf00550
Peptidoglycan biosynthesis
haf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
haf00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
C8233_07470
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
C8233_07470
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
haf01011
]
C8233_07470
Enzymes [BR:
haf01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
C8233_07470
Peptidoglycan biosynthesis and degradation proteins [BR:
haf01011
]
Precursor biosynthesis
Amino acid ligase
C8233_07470
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
GGDEF_2
OCD_Mu_crystall
Motif
Other DBs
NCBI-ProteinID:
AVV35447
LinkDB
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Position
complement(1829862..1831391)
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AA seq
509 aa
AA seq
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MLAALLALWPGALNDDCRARLAARDDWHLTIDSRSVAQGSLFIAIPGIASDGRDYISAAL
EGGAELVLAERPADGDARLALHSDDARVVWLESLGEQLGELGRQAFSVPESLTLVGVTGT
NGKSSVTHYIAELAEAMGTPAGMIGTLGIGRPGALVAGERTTPDALAVQAALKGLSLVGA
ELIAMEVSSHALDQGRVNGCRFTVAGYTNLSRDHLDYHGSMAAYAAAKAKLFKRPELKLA
VLNADDALARLMLAGMQRGVRVLAMGRDDVATLRVLDVFPEPLGQVAVIATPDGERELGL
NLMGRFNLDNALLAMLILHGLDYSFEGLFAAAPRLTPVPGRMQRLSCDGAPVVVVDYAHT
PEAVETALTALRAHLPARDDARLWCVLGCGGDRDSGKRPLMATAAEQGADRVVITDDNPR
TEDAAAIRQQMMTGIHARERVLDIAERGEAIAQVIRDAGEHDVILIAGKGHEDYQEIDGQ
RLPFSDVAHAVAALERRELSMLEGQERDA
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgctggcagcgttgctggcgctgtggccaggcgccctcaatgacgattgccgtgcacgg
cttgccgcgcgcgatgactggcacctgacgatcgacagtcgcagtgtcgcgcagggctcc
ctcttcattgccatccccggcatcgccagcgatggccgcgactatatctccgcggcgctt
gagggcggtgccgagctggtgctggccgaaagacccgccgacggggatgcacgcctcgcg
ctgcattcagacgatgccagagtcgtctggctcgagagtctgggcgagcagctcggtgag
ctgggccgccaggccttcagtgtgcccgagtcgctgacgctggtcggggtcacgggcacc
aatggcaagtcttccgtcacccattacatcgccgagctggccgaagcgatgggcacgccc
gccggcatgatcggcacgctcggcatcgggcgtcccggcgcgctggtcgcgggcgagcgc
accacgcccgacgccctggccgtgcaggcggcgctcaagggcctgagcctggtcggtgcc
gagctgatcgcgatggaagtctcttcccatgcgctggatcaggggcgcgttaatggctgt
cgcttcaccgtcgcgggctataccaatctttcgcgagaccacctcgactaccacggcagc
atggcggcctatgcggcggccaaggcgaagctgttcaagcgccccgaactcaagcttgcg
gtgctcaatgccgacgatgcgctggcgcgtctgatgctggccggcatgcagcgcggcgtg
cgcgtgctggcgatggggcgtgatgatgtcgcgaccctgcgcgtgctggatgtcttcccc
gagccgctgggccaggttgccgtgatcgcgacgccggatggcgagcgtgagctgggcctc
aatctgatggggcgcttcaatctcgacaacgccttgctggcaatgctgatcctgcatggc
ctcgactattcgttcgaggggctgtttgccgccgcgccgcgtctgacgccggtgccgggc
cgcatgcagcgcctgagttgtgatggcgcgccggtggtggtggtcgactacgcccacacg
ccggaggccgtcgagacggcactgaccgcgctgcgtgcccacctgccggcgcgggatgat
gcgcgcctgtggtgtgtactcggctgtggcggcgatcgcgacagcggcaagcgcccgctg
atggccacggccgccgaacagggcgccgaccgtgtcgtgatcaccgatgacaatccgcgc
accgaggatgccgctgccatccgtcagcagatgatgaccggcatccatgcccgcgagcgc
gtgctggatatcgccgagcgtggcgaagccattgcccaggtcatccgcgatgccggcgag
catgatgtcatcctgatcgccggcaaggggcacgaggactatcaggaaatcgacggtcag
cgactgccgttttccgatgtggctcatgcggtcgcggcgctggagcgtcgtgagctctcg
atgctggaaggtcaggagcgtgacgcatga
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