Halomonas sp. SF2003: C8233_14315
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Entry
C8233_14315 CDS
T05423
Name
(GenBank) multidrug efflux RND transporter permease subunit
KO
K18299
multidrug efflux pump
Organism
haf
Halomonas sp. SF2003
Brite
KEGG Orthology (KO) [BR:
haf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
haf02000
]
C8233_14315
01504 Antimicrobial resistance genes [BR:
haf01504
]
C8233_14315
Transporters [BR:
haf02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
C8233_14315
Antimicrobial resistance genes [BR:
haf01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexEF-OprN [MD:
M00641
]
C8233_14315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
AVV34663
LinkDB
All DBs
Position
complement(3456925..3460119)
Genome browser
AA seq
1064 aa
AA seq
DB search
MNISSFFIKRPVFAAVLSILIVISGMLSLFQLPISEYPEVVPPTVVVRANYPGANPEVIG
ATVATPLEQEITGVESMLYMDSQATSDGNLTLTVTFALGTDLDKAQVQVQNRVARATPRL
PQEVQQLGITTEKASPNLTMVVHLTSPDGRYDQLWLSNYARLNLKDNLARLEGVGDVQLF
GAGEYSMRVWLDPDAVAARGLSAGDIISALRAQNQQVAAGSVGAQPSPDDNQFQRLLNVR
GRLESAEEFENIVIRVDEDGRLTRLKDVARVELGADSYSLRAQLDGKDAVAMPIFQRPGS
NAIALSDSVRESMSEMSDAFPDGVSYDIVYDPTVFVRGSIEAVIDTLFEAILLVVIVVIL
FLQTWRASIIPLIAVPVSLIGTFAVMQLMGVSINTLSLFGLVLAIGIVVDDAIVVVENVE
RNIELGHSPIEATQIAMREVTGPIIAIALVLTAVFVPTAFISGLSGQFYKQFALTITIST
LISAFNSLTLSPALSALLLKPHGAKPDWLTRVIDGLFGRWLFAPFNRAFSAMANGYTGLI
KKLLRFGVIVGLLYVVLLGATGKLFDSVPGGFIPGQDKQYLVAMAQLPDAASLDRTSEVI
DEMQALALDTPGVAHTVAFPGLSVNGFVNASNSGIVFATLADFDERQSPELSGQAVAAQL
NQKFAGIDEAFVAVFPPPPILGLGTTGGFKLQLQDRGNKGFDELFSAVQTITAKGNADPR
LSSVYSSFRIQVPQYDIDLDREQAMIMGVPVERAFETLQVYMGSLYVNDFNRFGRTYQVR
AQAEQSARLDPDDIRNLKVRSDNGRMIPLGSFVKVTPTTGPDRVMHYNTFVSADINGSPA
PGVSSDQAKAAIEEVLAGNLPQGIGYEWTEVTYQQVLAGNTMIYIFPLVVLLVFLVLAAQ
YESWSLPLAIILIVPMTLLSALAGVWLTGGDNNIFTRIGLIVLVALACKNAILLVEFARE
QQHAGQSRLDAVLTACRLRLRPILMTSVAFTAGVVPLVLATGAGSEMRQAMGVAVFSGMI
GVTVFGLLLTPLFYVGIRRLVEKREAHQDTDTPDSNAESGRRIH
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
gtgaatatctccagcttcttcatcaagcgcccggtcttcgccgcggtgctgtcgatcctg
atcgtcatctccgggatgctgtcgctgttccagctgcccatctccgagtatccggaagtc
gtgccgcccaccgtggtggtgcgcgccaactacccgggtgccaaccccgaagtcatcggg
gccaccgtcgccacgccgctggagcaggaaatcaccggcgtcgaaagcatgctgtacatg
gactcccaggcgacctccgacggcaacctgaccctgacggtgaccttcgcgctgggcact
gacctggacaaggcccaggtgcaggtgcagaaccgtgtggcccgcgccacgccacgcctg
ccgcaggaggttcagcagctcggtatcaccaccgagaaggcctcgcccaacctgacgatg
gtggtccacctgacctccccggatggccgctatgaccagctgtggctgtccaactatgcg
cgcctgaacctgaaggacaatctcgcccgtctcgagggtgtcggcgacgtgcagctgttc
ggtgccggcgagtactcgatgcgcgtgtggctcgacccggacgccgtggcggcgcggggc
ctgtctgccggtgacatcatcagtgccctgcgggcccagaatcagcaggtcgccgccggc
tcggtcggtgcccagccctcgcctgacgacaaccagttccagcgcctgctcaacgtgcgg
ggccgcctggagagcgccgaggaattcgagaacatcgtcatccgtgtcgatgaagatggc
cgtctgacacgcctgaaggatgtggcgcgtgtcgaactgggcgccgacagctattcgctg
cgcgcgcagctggatggcaaagacgccgtggcgatgccgatcttccagcgccccggctca
aatgccatcgcgctgtcggattccgtgcgtgagagcatgagtgagatgtccgacgccttc
ccggatggcgtcagctacgacatcgtctatgacccgacggtcttcgtgcgtggctccatc
gaggcggtcatcgacaccctgttcgaggccatcctgctggtggtgatcgtggtgatcctg
ttcctgcagacctggcgggcctcgatcattccgttgatcgcggtgccggtctcgctgatc
gggacgtttgcggtcatgcagctgatgggcgtgtcgatcaatacgctgtcactgttcggg
ctggtgctcgccatcggtatcgtcgtcgatgacgccatcgtggtggtggagaatgtcgag
cgcaacatcgagctgggccactcgcccattgaggccacccagatcgccatgcgtgaggtg
accggcccgatcatcgccatcgcgctggtgttgacggcggtgttcgtgccgacggccttc
atcagcggcctgagcggtcagttctacaagcagttcgcgctgaccatcaccatctcgacg
ctcatctcggccttcaactcgctgacgctgtcaccggcgctgtcggctctgctgctcaag
ccccacggtgccaagcctgactggctgacccgcgtcatcgatggcctgttcggtcgctgg
ctgttcgcgccgttcaaccgcgccttcagtgcgatggccaacggctataccggcctgatc
aagaagctgctgcgcttcggtgtcatcgtcggcctgctgtatgtcgtactgctcggcgcc
accggcaagctgttcgacagcgtgcccggcggcttcatccccgggcaggacaagcagtac
ctggtcgcgatggcccagctaccggacgccgccagcctcgaccgcacctccgaggtcatc
gacgagatgcaggcactggcgctggacacaccgggcgtggcgcacaccgtggccttcccg
gggctctccgtgaacggcttcgtcaatgcctccaactccggcatcgtgttcgcgaccctg
gcggacttcgatgagcgacagtcgcccgagctttccggtcaggcggtcgccgctcagctg
aaccagaaattcgcggggatcgacgaggccttcgtcgccgtcttcccgccgccgccgatt
ctgggcctgggcactacggggggcttcaagttgcagttgcaggaccgtggcaacaagggc
ttcgatgagctgttctccgccgtgcagaccatcaccgccaagggcaatgctgacccacgt
ctgagcagtgtctactccagcttccgcatccaggtgccgcagtacgacatcgatctggat
cgcgagcaggcgatgatcatgggcgtgccggtggaacgtgccttcgagaccctgcaggtg
tacatgggatcgctgtacgtcaatgacttcaaccgcttcgggcgtacctatcaggtgcgc
gcccaggccgagcagtcggcgcgtctcgacccggatgacatccgcaacctcaaggtgcgc
agcgacaacggccgcatgattccgctgggcagcttcgtcaaggtgacaccgaccaccggc
ccggaccgcgtgatgcactacaacaccttcgtcagcgccgatatcaacggctcgccggcg
ccgggcgtctccagcgatcaggccaaggccgccatcgaggaagtgctggccggcaacctg
ccacagggtatcggctacgagtggacggaggtgacctaccagcaggtgctggccggcaac
accatgatctacatcttcccgctggtggtattgctggtgttcctggtgctggccgcccag
tacgagagctggtcgctgccgctggcgatcatcctgatcgtgccgatgacactgctgtcg
gcgctggccggtgtctggctgacggggggcgacaacaacatcttcacgcgcatcggcttg
atcgtgctggtggcgctggcgtgcaagaacgcgatcctgctggtcgagttcgctcgtgag
cagcagcatgctggccagagtcgtctggacgccgtgctgacggcctgtcgcctgcgcctg
cgccccatcctgatgacgtcggtagccttcaccgcgggggtggtgccgctggtactggcc
accggtgccggcagcgagatgcgtcaggcgatgggcgtggcggtgttctccggcatgatc
ggcgtcaccgtgttcggcctgctgctgacaccgctgttctatgtcggtatccgccgtctg
gtcgagaaacgtgaagcgcatcaggacactgacacgccggacagcaatgccgagtcaggc
cgccgcattcattga
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