Halomonas sp. SF2003: C8233_16885
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Entry
C8233_16885 CDS
T05423
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
haf
Halomonas sp. SF2003
Pathway
haf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
haf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
C8233_16885 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
haf03400
]
C8233_16885 (nth)
Enzymes [BR:
haf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
C8233_16885 (nth)
DNA repair and recombination proteins [BR:
haf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
C8233_16885 (nth)
Prokaryotic type
C8233_16885 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_8
P_gingi_FimA
HHH_5
DprA_N
Motif
Other DBs
NCBI-ProteinID:
AVV35084
LinkDB
All DBs
Position
complement(4080855..4081490)
Genome browser
AA seq
211 aa
AA seq
DB search
MNAQKRLEIFTRLRNENPEPRTELAWSTPFELLIAVLLSAQATDVGVNKATAKLYPVANT
PVSILALGVESLKEYIKTIGLFNTKAENVIKTCRMLIERHGGEVPQTREALEALPGVGRK
TANVVLNTAFGQPTMAVDTHIFRVSNRTRIAPGKSVLEVEHKLMRHVPKEFLVDAHHWLI
LHGRYTCVARKPRCGSCIIEDLCEYKDKVDL
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcccagaaacgcctcgagatcttcacccgtctgcgcaacgagaatcctgagcca
cgcaccgagcttgcctggtcaacgcccttcgagcttttgatcgcggtgctgctgtcggcg
caggcgacggatgtgggcgtcaacaaggccacggcgaagctgtatccggtcgccaatacg
ccggtgagcattcttgcgctgggcgtcgagagcctgaaggagtacatcaagacgatcggc
ctgttcaacaccaaggccgagaacgtcatcaagacctgccgcatgctgatcgaacggcat
ggtggcgaggtgccgcagacccgcgaggcgctggaagcgctgcccggcgtgggccgcaag
accgccaacgtggtgctcaacaccgccttcggtcagccgaccatggcggtggacacgcac
atcttccgcgtctccaaccgcacccgcatcgccccgggcaagagcgtgctggaagtcgag
cacaagctgatgcgccatgtgcccaaggagtttctggtcgacgcccaccactggctgatc
ctgcatggccgctacacctgcgtggcacgcaagccgcgctgtggcagctgcatcatcgaa
gacctctgcgagtacaaggacaaggtcgacctgtaa
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