Halomonas sp. GFAJ-1: BB497_08475
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Entry
BB497_08475 CDS
T05375
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
hag
Halomonas sp. GFAJ-1
Pathway
hag00020
Citrate cycle (TCA cycle)
hag00785
Lipoic acid metabolism
hag01100
Metabolic pathways
hag01110
Biosynthesis of secondary metabolites
hag01120
Microbial metabolism in diverse environments
hag01200
Carbon metabolism
hag01210
2-Oxocarboxylic acid metabolism
Module
hag_M00009
Citrate cycle (TCA cycle, Krebs cycle)
hag_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
hag00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
BB497_08475
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
BB497_08475
Enzymes [BR:
hag01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
BB497_08475
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GFIT
Motif
Pfam:
Transket_pyr
OxoGdeHyase_C
E1_dh
2-oxogl_dehyd_N
SHOCT-like_DUF2089-C
PFOR_II
Motif
Other DBs
NCBI-ProteinID:
AVI62737
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All DBs
Position
1849610..1852444
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AA seq
944 aa
AA seq
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MQQGIMDLMWRSSHVSGGNVHYVEALYEQYLADPDSVPDEWRSYFDQLPRSEGSASHDVP
LSPIRDQFYQLGRESRPGQVVATVDSGENKKQVKVLQLINAYRFRGHQKANIDPLGLRNP
TPIPDLDLSFHQLSKADLDTEFQTGSFFLGIDKAPLRVIVDALEQTYCRSIGCEIMHIVD
TEEKRWLQRRFESVRSAPKFSDDVRKHILERLTAAEGLENYLASKYPGTKRFGLEGGESF
VPMMDELIQRAGGYGTKEVVIGMAHRGRLNLLVNILGKNPTDLIDEFDGKKVIERGSGDV
KYHQGFSSNVMSPGGEVHLAMSFNPSHLEIVAPVVEGSVRARQDRRNDEEGSKVLPINVH
GDAAFAGQGVVMETFQMSQTRAYKTGGTVHIVINNQVGFTTSNPLDSRSTEYCTDIAKMV
QAPIFHVNGDDPDAVIHATQVALDYRQQFKKDVVIDLVCYRRRGHNEADEPSGTQPMMYA
KIKDHASSRTLYAKRLVEQGVISEEDAKAMVETYRDDLVAGNHVANALVQEPNTTLFVDW
APYLGHEWSGDADTTFDMKRLQQLAAKMCEIPDGVDVQRQVAKIYEDRRKMQAGGMGLNW
GFAETLAYATLLDQGHPIRITGQDVGRGTFSHRHAVVHNQKDGSTYVPLQNMADSQPRFT
IHDSFLSEEAVLAFEYGYATTAPNHLVIWEAQFGDFFNGAQVVVDQFISSGETKWGRLCG
LTMLLPHGYEGQGPEHSSARLERFLQLCAEHNMQVCVPTTPAQIYHLLRRQVIRPLRKPL
IVMSPKSLLRHKDAVSSLEDLAHGKFNMVLPDQAELAAEQVTRVIMCAGKVYYDLANWRA
ENERNDTAIIRLEQLYPFPKEELLDVLQAYANVEDIVWCQEEPLNQGAWYSSQHHMRAVA
DILKDGFGRELKFAGRPASAAPAAGYMSVHTEQQRQLVEDAFNL
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaaggcataatggatttaatgtggcgttcttctcacgttagtggcggcaatgtc
cactacgtggaagcgctttatgagcagtacctcgccgatcccgattctgtccctgacgag
tggcgcagctattttgaccagctgccgcgttctgagggcagtgcctcccacgatgttcca
ctaagtccgattcgtgatcagttctaccagctaggccgggaaagccgtcctgggcaggtg
gtcgccactgttgatagtggtgaaaacaaaaagcaggtgaaagtcctgcagctgattaac
gcctatcgcttccgtggtcatcagaaggctaatatcgacccgctagggctgcgtaatccc
acccccattcccgacctcgacttgtcgttccatcagctctcaaaagctgatctagacacc
gagttccagaccggttcgtttttcttaggtatcgataaagcgccgctgcgtgtaatcgtc
gatgcgctggagcagacgtattgccgctccatcggctgcgagatcatgcacatcgttgat
accgaagagaaacgctggctgcagcggcgttttgagtcggttcgcagtgcccccaaattt
agcgatgacgtgcgcaagcatatacttgagcgcttaaccgctgctgaaggtttggaaaat
tacctggcgtctaaatacccaggcaccaaacgttttggtttggaaggcggcgaatcattt
gttccgatgatggacgaactcatccagcgtgccggtggttatggcactaaagaagtcgtt
atcggtatggctcaccgcggtcgcctcaacctgttggtcaatattctgggtaaaaaccca
actgacttgatcgacgagttcgatggcaaaaaagtgattgagcgtggttctggcgacgtt
aaataccaccagggctttagttctaacgtcatgtcccctggtggtgaagtccacttggcc
atgtctttcaacccgtcgcacctggaaattgtggcgccggtagttgaaggctcggtgcgt
gcacgtcaagaccgccgcaatgacgaagagggcagcaaagtactgccaatcaacgttcat
ggtgatgctgcctttgctggacagggcgtggttatggagacattccagatgtctcaaacc
cgcgcttacaaaaccggcggcacggttcatatcgtgattaacaaccaggtgggtttcaca
acatcgaacccgctggattcacgttctactgaatactgtaccgatatcgccaaaatggtt
caggcgccgattttccacgttaacggcgatgaccccgatgctgtcattcacgcgacccaa
gtggcgctggattaccgccagcagttcaagaaagacgtggtgatcgacctggtgtgctat
cgccgtcgcggccataatgaagccgacgagccgtcaggcacccagccgatgatgtacgcc
aaaatcaaagaccacgcctcctcgcgtactttgtatgccaagcggttggtcgagcagggc
gttatttctgaagaagacgctaaagcgatggtcgaaacctatcgcgatgacttagtggca
ggtaatcacgttgccaatgcgctggttcaagagcctaacaccacgctattcgtggattgg
gcaccgtacctggggcatgagtggagcggcgacgcagacactacctttgatatgaagcgt
ctgcagcagctcgcggcaaaaatgtgcgagattcctgacggggtcgatgtacagcgccaa
gtggctaagatttacgaagatcgccgtaagatgcaggcgggtggcatggggcttaactgg
ggcttcgctgaaacccttgcttacgccacgttgcttgatcaaggccacccgattcgtatc
acgggtcaggacgttggtcgcggtaccttctcgcatcgtcatgcggtggtacataaccag
aaagatggttctacctacgtaccgctgcaaaacatggccgacagtcagccgcgttttact
atccacgactccttcctttccgaagaagccgtgctagcgtttgaatacggttacgctact
accgcaccgaatcatctagtcatttgggaagcccagtttggtgacttcttcaacggtgcc
caggtagtggtcgaccagttcatctcctcgggtgaaaccaagtggggtcgcctgtgtggt
ttaaccatgctgctgccgcatggctacgaaggccaagggccagagcactcctctgcgcgt
ctggagcgcttcttgcaactgtgtgctgagcacaatatgcaggtatgtgtgcctaccaca
ccggcgcagatttaccacctgctgcgtcgccaggtaattcgcccactgcgtaaaccgctg
atcgtaatgtcgcctaagtcgctcttacgccataaagacgctgtgtccagccttgaagac
cttgcccatggcaagttcaacatggtattgccggatcaggcagagcttgcggctgagcag
gtcactcgcgtgatcatgtgcgccggtaaggtgtactacgatttagctaactggcgtgct
gaaaacgagcgtaacgatacggcgattattcgtcttgagcagctctatcccttcccgaaa
gaagagcttctggatgtgctccaggcgtatgccaatgtggaagacattgtgtggtgtcag
gaagagccgttgaaccaaggcgcctggtactccagtcagcaccacatgcgtgccgtagcc
gatatacttaaagatggctttggacgtgagttgaaatttgcaggacgtcctgcctcggct
gctccggcagcaggctatatgtccgtccacactgaacagcagcgccagctggtggaagac
gcttttaacctataa
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