Helicobacter ailurogastricus: ASB7_08510
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Entry
ASB7_08510 CDS
T08780
Name
(GenBank) hypothetical protein
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
hail
Helicobacter ailurogastricus
Pathway
hail03030
DNA replication
hail03410
Base excision repair
hail03420
Nucleotide excision repair
hail03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hail00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ASB7_08510
03410 Base excision repair
ASB7_08510
03420 Nucleotide excision repair
ASB7_08510
03430 Mismatch repair
ASB7_08510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hail03032
]
ASB7_08510
03400 DNA repair and recombination proteins [BR:
hail03400
]
ASB7_08510
Enzymes [BR:
hail01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
ASB7_08510
DNA replication proteins [BR:
hail03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
ASB7_08510
DNA repair and recombination proteins [BR:
hail03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
ASB7_08510
NER (nucleotide excision repair)
GGR (global genome repair) factors
ASB7_08510
MMR (mismatch excision repair)
DNA ligase
ASB7_08510
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
ASB7_08510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
RNA_lig_T4_1
Nlig-Ia
Motif
Other DBs
NCBI-ProteinID:
BDQ29014
LinkDB
All DBs
Position
complement(788714..789952)
Genome browser
AA seq
412 aa
AA seq
DB search
MIQTLQDYHRLVEKLCTLAHHYYVLASPLVSDEIYDQLYREALAYEEAHPADILAHSPTQ
RVGGEVVPFLPKQEHKVRMWSLDNVFNFKELQEWLKRLSDFAKAPLESFICSPKLDGASL
NLYYENGQLVSASMRGNGVVGELVTHNAKTIRSIPLKIPYTKPIEIRGEVVLLKEDFKAL
NAQRLAQNLAPFANARNASVGSLRQLNSSVTAQRKLTFYPWGLGLCPRAFNSLQKAMQEV
QEWGFLSLNFVACSSAEEIQNTFESFCASRASAPYEADGMVAMLDNLALQNALGFTIKAP
RFAIAYKFATAEKCTKLLKVINQVGRSGAITPVGVLEPVSVQGALVSRATLDNYTQIQQQ
DLQINDIVVVVRSGDVIPKILRALKELRDHTQKKITPPPIAPAVPPPCKPKL
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgatccaaactttacaagactaccaccgcttggttgaaaaactttgcactttagcccac
cattactatgtgttggctagccccctagtgagcgatgagatttacgatcaactctaccgc
gaagccctagcctatgaagaggcgcaccccgccgacattttagcccactcgcccacccaa
cgcgtgggcggcgaagttgtgccctttttgcccaaacaagagcataaggtgcgtatgtgg
agcttagacaatgtctttaatttcaaagagttgcaagagtggctcaaacgcctaagcgac
tttgccaaagcccctctagagtccttcatctgctcacccaaactagacggggcatcgctc
aatctctactacgaaaacgggcaattagtgagcgcgagcatgcgcggcaatggcgtggtg
ggcgagctcgttacccacaacgccaaaacgatccgctccatccccttaaaaatcccctac
accaagcccattgaaattaggggcgaagtggtcttattaaaagaagactttaaagcctta
aacgcccaaagactggcgcaaaatttagccccctttgccaacgctcgcaatgccagcgta
ggcagcttgcgccagctaaactccagtgtaaccgcccaaagaaagctcaccttttatcca
tgggggctggggctttgtccgcgcgcatttaacagcttgcaaaaagccatgcaagaggtg
caagagtgggggtttttaagtttaaattttgtggcgtgcagcagtgctgaagagatacaa
aacacttttgagtctttttgtgctagccgtgctagtgctccctatgaggccgatggcatg
gttgccatgctcgacaatctagccttacaaaatgcgctgggttttaccattaaagccccc
cgttttgcgattgcctataaattcgccactgccgaaaaatgcaccaaacttttaaaggtc
atcaaccaagtggggcgcagcggggcaatcacccccgtgggcgttttagagcccgtgtcc
gtgcaaggagcgttggtgtctcgtgccaccctagacaattacacccaaatacagcaacaa
gacctacagatcaacgacattgtggttgtggtgcgcagtggcgatgtgattcctaaaatt
ttacgcgccttaaaagagttgagagaccacacccaaaagaaaatcacccccccacccatt
gccccagctgtgccaccgccttgcaagcccaagctttaa
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