Haloplanus rubicundus CBA1113: DU500_10350 Help Entry DU500_10350       CDS       T05613                                  Name (GenBank) NAD-dependent DNA ligase LigA   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism haj  Haloplanus rubicundus CBA1113 Pathway haj03030   DNA replication haj03410   Base excision repair haj03420   Nucleotide excision repair haj03430   Mismatch repair Brite KEGG Orthology (KO) [BR:haj00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     DU500_10350    03410 Base excision repair     DU500_10350    03420 Nucleotide excision repair     DU500_10350    03430 Mismatch repair     DU500_10350  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:haj03032]     DU500_10350    03400 DNA repair and recombination proteins [BR:haj03400]     DU500_10350 Enzymes [BR:haj01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      DU500_10350 DNA replication proteins [BR:haj03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      DU500_10350 DNA repair and recombination proteins [BR:haj03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      DU500_10350    NER (nucleotide excision repair)     GGR (global genome repair) factors      DU500_10350    MMR (mismatch excision repair)     DNA ligase      DU500_10350   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       DU500_10350 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden OB_DNA_ligase HHH_2 HHH_5 BRCT HHH DNA_ligase_ZBD Nlig-Ia HHH_3 DZR_2 BRCT_2 HGD-D DUF7576 PTCB-BRCT Motif Other DBs NCBI-ProteinID:  AXG06798 UniProt:  A0A345E3M6 LinkDB All DBs Position complement(2059066..2061102) Genome browser AA seq 678 aa AA seqDB search MVEEPADNPYVRDPDTSFAPVEELSEGDAREQVRRLREAIEYHDYRYYVANDPIVADRTY DTLFERLEALEDAFDCHDENSPTRRVGGEPLDELETVEHVAPLLSLQSSGDADEIRAFDR RIRDRVADVRYSAEPKFDGFSVEVVYEDGGFDRAVTRGDGREGEDVSANVRTIGSVPLHL PDGAPDFLAVRGEVYMPRSGFQELNERRIERGDDPFANPRNAAAGTVRLLDPETVADRPL DVFFYDVIDTSATLDTQTEAFALLRELGFRVNDETTVVDDVDVVIDYRDRLADARDELEY EIDGIVAKVVDFDAREELGSTARHPRWAFAYKFPARTGETTVERIVVQVGRTGKLTPVAL LDPVDVQGVTISRATLHNAAQIRDLGVQNGATVRLERAGDVIPEVVEVVEGGDGDFAMPE TCPVCDGHVVQEGEHHYCTNASCPAQLRRSLQHFCSRDAMDVEGVGAEAADQLVEEGLVE SLADLYDLDRDELAALDGWGERSADNLLAELEASKTVDLGTFVYALGIRHVGTERARALA AAFSLDDLIDASAEDLRSVEDVGPEVAESVAAYFDEAENVETVERLLEAGVSPERRERDD ELDGLTVVFTGSVPGYTRSELTELLETHGASVTSSVSGATDYLVVGENPGTRKRERADEE GVETLDPEAFEARILSRL NT seq 2037 nt NT seq  +upstreamnt  +downstreamnt atggtcgaggaacccgccgacaacccgtacgttcgagaccccgacacgtcgttcgcgccg gtcgaggaactgagcgagggcgacgcccgcgagcaggttcgtcgcctgcgcgaggccatc gagtatcacgactaccgatactacgtcgcgaacgatcccatcgtcgccgaccgcacctac gacacgctgttcgagcgactggaggcactggaggacgcgttcgactgccacgacgagaac tcgccgacccggcgggttggtggcgaaccgctcgacgaactggagacggtcgaacacgtc gcccccctgttgagcctgcagtcctcgggcgacgccgacgaaattcgggcgttcgaccgc cgcatccgcgaccgggtggcggacgtgcgctactccgccgaacccaaattcgacggcttc tcggtcgaagtcgtctacgaggacggcggcttcgaccgcgccgtcactcgcggcgacggc cgcgagggcgaggacgtgtcggcgaacgtccgcaccatcgggagcgtccccctccacctt cccgacggcgcgccggactttctcgccgtccggggcgaggtgtacatgccccgctcgggg tttcaggaactgaacgagcgtcggatcgaacgcggcgacgacccgttcgccaacccgcgc aacgccgcggcggggacggtccgtctcctcgaccccgagacggtcgccgaccgccctctc gacgttttcttctacgacgtgatcgacacgtcggccaccctcgacacgcagaccgaggcg ttcgccctcctgcgtgagctcggcttccgggtcaacgacgagacgaccgtcgtcgacgac gtggacgtagtgatcgactaccgcgaccgactcgcggacgcgcgcgacgagttggagtac gaaatcgacggcatcgtcgccaaagtcgtggacttcgacgcccgcgaggagttggggtcg accgcgcgccacccgcgctgggccttcgcctacaagttccccgcccggaccggcgagacg accgtcgagcgaatcgtcgtgcaggtgggacggacggggaagctgacgccggtcgccctg ctcgaccccgtcgacgtacagggcgtcacgatcagtcgcgcgaccctccacaacgccgcc cagattcgggatctgggtgttcagaacggggcgaccgtccggctggaacgcgcaggcgac gtgatccccgaagtggtcgaggtggtcgagggtggcgatggcgacttcgcgatgcccgag acctgtcccgtctgtgacggtcacgtggtacaggagggcgaacaccactactgtacgaac gcgtcgtgtcccgcccagctacgacggtcgctccagcacttctgttcgcgcgacgccatg gacgtcgagggcgtcggcgcggaggcggcggatcaactggtcgaggagggcctggtcgag tcgctggcggacctctacgatctggaccgcgacgaactcgcggcgctcgacgggtggggc gagcggtccgcggacaacctgctcgcggaactggaggcgagcaagacggtggacctcggc accttcgtctacgccctcggcatccgccacgtcgggacggagcgggcacgggcgcttgcg gcggcgttctcgctcgacgacctgatcgacgcgagcgccgaggacctgcggtcggtcgaa gacgtcggcccggaggtagccgagtcggtcgccgcctacttcgacgaggcggagaacgtc gagacggtggagcgactgctggaggcgggcgtttcgcccgaacggcgggagcgcgacgac gaactcgacgggctgaccgtcgtcttcaccgggagcgtgccggggtacacccggtcggaa ctgacggagctactcgaaacacacggcgcgtcggtcacgtcgtcggtcagcggcgcgacg gactacctcgtcgtcggggagaatccggggacgcggaagcgggagcgagccgacgaggag ggggtcgagacgctcgaccccgaggcgttcgaggcgcggattctgtcgcggctgtag

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