Halomonas sp. KO116: KO116_03557 Help Entry KO116_03557       CDS       T03800                                  Name (GenBank) DNA ligase   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism hak  Halomonas sp. KO116 Pathway hak03030   DNA replication hak03410   Base excision repair hak03420   Nucleotide excision repair hak03430   Mismatch repair Brite KEGG Orthology (KO) [BR:hak00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     KO116_03557    03410 Base excision repair     KO116_03557    03420 Nucleotide excision repair     KO116_03557    03430 Mismatch repair     KO116_03557  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:hak03032]     KO116_03557    03400 DNA repair and recombination proteins [BR:hak03400]     KO116_03557 Enzymes [BR:hak01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      KO116_03557 DNA replication proteins [BR:hak03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      KO116_03557 DNA repair and recombination proteins [BR:hak03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      KO116_03557    NER (nucleotide excision repair)     GGR (global genome repair) factors      KO116_03557    MMR (mismatch excision repair)     DNA ligase      KO116_03557   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       KO116_03557 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 HHH_5 BRCT DNA_ligase_ZBD Nlig-Ia PTCB-BRCT HHH 5_3_exonuc RNA_pol_A_CTD DZR_2 Motif Other DBs NCBI-ProteinID:  AJY52024 UniProt:  A0A0D5M6I9 LinkDB All DBs Position complement(3861010..3863043) Genome browser AA seq 677 aa AA seqDB search MSKSDSQPLEEITQLRAALDEANYRYYVLDDPTLTDADYDRQLQRLQQLEASHPELITSD SPTQRVGAAPADGFPSVAHAIPMLSLDNAFSREDIHAFAERVAERLECSADEVEFTCEPK LDGAAVSLVFEQGVLVSGATRGDGRTGEGITSNLRTLRSVPLKLMGKNVPELLEVRGEVI MRHAGFEALNERAREEGNKVFANPRNAAAGSLRHLDPRITAKRPLEFHAYQAARLEPDLG DTTHSELMARLSTLGFRASAELKVVKGPQAVADYCEQLGEKRDALGFDIDGVVIKVNDLR YQRELGFVARAPRWAVAFKYPAQEEVTTLNDVEFQVGRTGAITPVARLEPVTVAGVTVSN ATLHNADEITRLDVMIGDTVSIRRAGDVIPQVVRVHVEQRPADARAIVFPEHCPVCGSDI ERVDGEAVARCSGGLYCAAQRKEALKHFASRKALDIDGLGEKLIVQLVDLDWVKTPADLF HLSVEQLKSLPRMGEKSANNLVNSLEKAKSTTLARFIYALGIREVGEATAANLANHFGTL ETVQTAELAALEAVNDVGPIVAAHVHTFFRQPHNQETIAALIDAGVTWQEAVVTQGPTPL EGQIWVLTGSLESMTRDEGKARLQALGAKVAGSVSKKTTCLVAGEAAGSKLTKAEQMGVE VIDEATFMERLAEWEQS NT seq 2034 nt NT seq  +upstreamnt  +downstreamnt atgagcaagtctgattctcaaccgttggaagagattacccagctgcgggccgccctggat gaggcaaactaccgctattacgtgctggatgatcctacccttaccgatgccgactacgac cgtcagctgcagcgtttacagcaattggaagccagccatccagaactgatcaccagcgat tctcccacccagcgtgtaggtgccgccccagccgatggctttccatcagtggcgcacgca atccctatgctgtcgttggataatgcctttagccgcgaggatatccatgcctttgccgag cgagtggcggaacggttggagtgcagtgcagacgaggttgagtttacctgcgagcctaag ctggacggcgcggcggtgtcgctggtttttgagcagggcgtgctggtgagcggcgccacc cggggagatgggcgtaccggtgaaggcatcacctctaacctgcgcactttgcgttcggtg ccgttaaagctgatgggcaaaaacgtacccgagctgctagaagtgcgtggtgaagtgatt atgcgccatgcagggtttgaggcgttgaacgagcgcgctcgggaagagggcaacaaggta tttgccaatccgcgcaatgcggcggcaggcagcctgcgtcacctcgacccgcgtattacc gcgaaacgtccacttgaatttcacgcctatcaggccgcccgcttggaacctgatttaggc gataccacccacagcgaactaatggcacggttatccacgttaggatttcgcgccagtgca gagctaaaagttgtcaaaggcccacaagctgtcgccgactactgcgagcagttgggcgaa aaacgcgatgcgcttggctttgatatcgacggcgtggtgatcaaggtgaatgacctgcgc taccagcgtgagctgggctttgtcgcccgcgcgccacgttgggcggtggcgtttaagtat cctgctcaggaagaggtcaccacgcttaacgatgtcgagttccaggttggccgtaccggg gcaatcacgccggtggcgcggcttgaaccggtcaccgtggcaggcgtgacggtctccaat gccacgctgcataacgccgatgaaatcacccgcctggacgtgatgattggtgatacagtc tccatccgccgagctggcgacgttatccctcaggtagttagagtgcatgttgaacagcgg cctgcggatgccagggccattgtttttcctgaacactgcccggtatgtgggtcggatatt gagcgcgttgatggcgaagcggtggcgcgctgttccggcggcctctactgcgccgcccag cgcaaagaggcgttgaagcacttcgccagccgcaaggcgctggatatcgacggcctgggc gagaagctgattgtgcaactggtcgacttggattgggtcaaaaccccggcggacctgttt catttgagtgttgagcagctaaaaagcctgccgcggatgggcgagaagtcagccaataat ttggtcaactcgcttgaaaaagccaaatcgaccaccctggcgcggtttatttacgcgctg gggatccgtgaagtaggcgaagccacagcggccaaccttgctaatcactttggcacgctt gaaaccgtccaaacggcggaactggcagcgctggaagcagtcaacgatgtcggcccgatt gtcgccgcccacgtgcatacttttttccgccagccacacaaccaggaaaccattgccgca ctgattgatgccggagttacctggcaggaagccgtcgttacccaaggcccaacgccgctg gaaggccagatctgggtattgacggggtcgcttgagagtatgacccgcgatgagggcaag gcgcgcttgcaggcattaggggcgaaggtagcgggcagcgtgtcgaagaagactacctgt ctcgtcgctggcgaagccgcaggcagtaagctaaccaaagccgagcagatgggtgtagaa gtgatcgatgaagcgacctttatggaacgtttggcagagtgggagcagagttaa

DBGET integrated database retrieval system