KEGG   Hemitrygon akajei (red stingray): 140715120
Entry
140715120         CDS       T11019                                 
Symbol
smndc1
Name
(RefSeq) survival of motor neuron-related-splicing factor 30
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
haka  Hemitrygon akajei (red stingray)
Pathway
haka03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:haka00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    140715120 (smndc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:haka03041]
    140715120 (smndc1)
Spliceosome [BR:haka03041]
 Complex A
  U2 snRNP components
   U2 related factors
    140715120 (smndc1)
 Complex B
    140715120 (smndc1)
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    140715120 (smndc1)
SSDB
Motif
Pfam: SMN_Tudor TUDOR DUF2067 SH3_Hsr9 T3SS_needle_F
Other DBs
NCBI-GeneID: 140715120
NCBI-ProteinID: XP_072882959
LinkDB
Position
23:3273740..3293813
AA seq 238 aa
MSDELAKQLASYKAQLQQVEAALSTDAENEDLLKLQKDLQEVIELTKDLLSNQPSVATAN
ADSSANSVSSHKWKTGDKCMAIWNEDGQLYEAEIEEIDQENGTAAITFTGYGNADVLPLA
NLKPVEEGNDSEELGGDKPKSKKEMVAQQREYKKKKALKKAQRMKELEQEREEQKVKWQQ
FNNRAYSKNKKGQVKKSIFASPESVTGKVGVGTCGIADRPMTQYQDTSKYNVRHLMPQ
NT seq 717 nt   +upstreamnt  +downstreamnt
atgtcagatgagctggcaaagcagctagccagttacaaggctcaacttcaacaagtagaa
gctgctttatctactgatgcagaaaatgaagacctccttaaattacaaaaggatctgcag
gaagtcatagaacttaccaaggacttgctatcaaatcagccttctgttgccacagccaat
gcagatagctcagcaaattctgtgtccagccataaatggaagactggtgacaagtgtatg
gccatttggaatgaagacggacaattgtatgaggcggaaattgaagagattgaccaggag
aatggtacggctgccatcacctttactggatacggtaatgccgatgtgcttcctttggcc
aacttgaaacctgttgaagaaggaaatgatagtgaagagctgggcggcgacaaacccaaa
tcaaagaaagaaatggttgcccagcagagggagtataagaagaagaaagctttgaaaaag
gcccagagaatgaaggagcttgaacaggaacgagaggaacaaaaagtaaaatggcagcaa
tttaataacagagcttattctaagaacaaaaagggacaggtaaagaaaagcatttttgct
tcaccggaaagcgtgactggaaaagttggagttggcacatgtggtatagcagacagaccg
atgactcagtaccaagacacatccaagtataatgtgcggcatcttatgccgcagtaa

DBGET integrated database retrieval system