Hemitrygon akajei (red stingray): 140715370
Help
Entry
140715370 CDS
T11019
Symbol
lgi1b
Name
(RefSeq) leucine-rich glioma-inactivated protein 1b
KO
K25428
leucine-rich repeat LGI family member 1
Organism
haka Hemitrygon akajei (red stingray)
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
140715370 (lgi1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EPTP
LRR_8
LRR_4
LRR_9
Toxin_11
LRRCT
LysM2_CERK1_LYK3_4_5
Motif
Other DBs
NCBI-GeneID:
140715370
NCBI-ProteinID:
XP_072883558
LinkDB
All DBs
Position
23:complement(38983714..39004229)
Genome browser
AA seq
542 aa
AA seq
DB search
MGDASKFTGRFTLLVCILSLFLSKIVAKPVKCPESCICTEETAQCYNRKSIPLSFPSGVV
NLSFMNSAFHEIRERSFMNLKSLQLLLFTSNTFYLIANDAFKGLDHLEYLFIENNKIQSI
SRHALRGLETLTHLSLANNNLQALPKDLFKDLDALTKVELGGNSFHCGCKLKWLVGWLIS
TNATADEIICENPVQYKGRKIRSLPLNEFDCITTDFVPYQTLKFQSISIESFNYMNDIYV
VITQPFAGNCSIFEWDHVEMEFRNFDNITGISTVFCKPLIVEGKLFVVVAQLFGGSHIYK
RDTFANKFIKTQDINILKIRKPNDIESFQIEGESFFVIADSSKAGTTTIYKWNGNGFYSH
QLLHRWYRDIDVEYIEIANKPHLILLSSSQRPVVFQWNKGKKEFAWRIDIPDTEDVHAVK
HFKIKDNLYICLTRFLGDSKIMKWESSMFVEVQSFPSRGSMVLQPLQINKWQYAFLGSDF
SLTQIFQWNTEKRKFVKFNETFFLSPRGFTFVLADNREFLFVSSFKAKTQIYEHIIIDTS
WT
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgggagatgctagtaaatttacaggaagattcactttgttagtctgcatactgagtctt
tttctttcaaaaattgttgccaaaccagtaaaatgtcctgaaagttgtatatgtaccgaa
gaaacagcccaatgttacaacagaaaatcgattccactgagttttccctcaggagtagtt
aatttgtcattcatgaactctgctttccacgaaatacgagaaagaagctttatgaattta
aagtcgctccagcttcttttgttcacttcaaacacattttatttgattgccaatgatgca
ttcaagggactcgatcacctagaatatctctttatagaaaataataaaatccagtccatt
tcaagacatgctctccgaggacttgagactctaactcatttaagtttggccaataataac
cttcaagcacttcctaaagatttattcaaagacctggatgcattaaccaaagtagaactt
ggtggcaattcattccactgtggttgcaaattgaaatggctggttggatggttgattagc
accaatgcaacagctgatgagatcatttgtgaaaatccagttcagtataagggaaggaag
atacgcagcctcccgcttaatgaatttgactgcataaccacagattttgttccttaccag
accctgaaatttcaatcgatatcaattgaaagctttaattacatgaatgatatatatgta
gtgattacgcaaccttttgctgggaactgcagcatatttgaatgggatcatgtggaaatg
gaatttcggaatttcgacaacattactggcatttcaacagttttctgtaaaccattgatt
gtcgagggtaagctatttgttgttgttgcccagctctttggtggctctcacatatataaa
agagatacttttgccaataagtttattaaaacacaggatattaatatcttaaaaatcaga
aaaccaaatgacattgaatcatttcaaattgagggagaatcattcttcgttattgctgat
agttcaaaggctggaactacaaccatctacaaatggaatggaaatggattttattctcat
caattattgcatcgttggtacagggatatagatgtggagtacattgaaattgctaacaag
ccacatttaatcctgttaagtagctcccaacgacctgtggtctttcagtggaacaaagga
aagaaagaatttgcttggcgcattgacattcctgatacagaagatgtacatgcagtcaag
cattttaaaatcaaagataatttgtacatttgcttaacaagattccttggtgactctaag
ataatgaaatgggaaagctccatgtttgtggaagtacagtcgtttccatctagaggatcc
atggtactgcagcctcttcaaataaacaaatggcaatatgctttcctgggaagtgacttc
tcgctcacccagatttttcagtggaatacagaaaaaagaaaatttgtgaaatttaatgaa
acttttttcctgtctccaaggggattcacttttgtattagcagacaaccgtgagtttttg
tttgtatcaagtttcaaagccaaaacacaaatatatgaacacattataattgacacaagt
tggacctaa
DBGET
integrated database retrieval system
