Hemitrygon akajei (red stingray): 140724918
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Entry
140724918 CDS
T11019
Symbol
traf3
Name
(RefSeq) TNF receptor-associated factor 3 isoform X1
KO
K03174
TNF receptor-associated factor 3
Organism
haka Hemitrygon akajei (red stingray)
Pathway
haka04620
Toll-like receptor signaling pathway
haka04621
NOD-like receptor signaling pathway
haka04622
RIG-I-like receptor signaling pathway
haka05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
140724918 (traf3)
04621 NOD-like receptor signaling pathway
140724918 (traf3)
04622 RIG-I-like receptor signaling pathway
140724918 (traf3)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
140724918 (traf3)
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Ortholog
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GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
TRAF3_RING
Sina_ZnF
zf-TRAF_2
zf-C3HC4
zf-C3HC4_2
CCDC18_2nd
Fez1
zf_UBZ
Motif
Other DBs
NCBI-GeneID:
140724918
NCBI-ProteinID:
XP_072895815
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Position
3:43731603..43809396
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AA seq
578 aa
AA seq
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MATARNIESLAPLFSPESLAQQANVTQVQDGRISSLSIEPEDGGFKEKFVVTVENKYKCE
HCCLPLCNPKQTACGHRFCGSCMQKILGNPSSVCPLDNEPLYEDAVFTDTCCRKEILALQ
IYCRNEINGCKIQLPLGKLEAHLHECPYQEVRCARRGCTEKVQRKDLADHLNSTCTYREQ
ACKYCNKKITIAELKKHEDFDCPAFLVLCPNKCNTFILRGELNNHQLQCLNVTMSCPFSQ
YGCNFQGNNQEMKMHEVSTMAQHLKYVLLKNEHLEKTVLDLQNKLQEKCKMVDIMSAQIS
HLEKEQSKFAQLASKNESRLGHMQKMLASQTDKLMNIDQTSQQTYQRQEETARDANILRE
SIDHLQTRIRQLELPGRTAGPGMGAASLTELSNQLKRFDSLLSVHDVRLADMDLRFQLLE
TVSYNGKLIWKIRDYRRRKQEAVNGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTH
LSLFFVIMRGEYDALLPWPFKQKVTLMLLDQGQANRHLGDAFKPDPNSSSFKQPVGEMNI
ASGCPLFVAQTVLESGTYIKDDTIFIKVVVDTSDMPDP
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atggcaacagcaagaaacatagagtcattggcacccctgttttccccggaatcgttggca
cagcaggcgaatgtaacccaggttcaagatggtaggatatcatctctaagcattgaaccg
gaggatgggggtttcaaggagaaatttgtagtgactgtggaaaacaagtacaagtgtgag
cattgctgtcttccgctctgcaatccgaagcaaaccgcgtgtggccacaggttctgtgga
agctgtatgcaaaaaattcttgggaatccaagttctgtgtgcccacttgataacgagcct
ttatatgaggatgcggtttttacggacacctgctgtagaaaggagattctagcacttcaa
atctattgtaggaatgaaataaatggatgcaagatacagctacctctaggaaagcttgag
gctcacttacatgaatgtccttaccaggaagttcgatgtgctcgcagggggtgcacagaa
aaggttcagaggaaggacttagctgaccatttaaattcaacttgtacatatcgggagcaa
gcctgtaaatactgcaataaaaaaataacgattgcagagttaaagaaacatgaagatttt
gactgtcctgcattcctagtcctatgccctaataagtgcaatacttttattctgagagga
gagttaaataaccaccagttacagtgtctcaatgtgacgatgtcctgtcctttctctcag
tatggatgcaatttccagggaaacaaccaagaaatgaaaatgcatgaagttagtacaatg
gcccagcatttaaaatatgtgctattgaagaatgaacatctcgaaaaaacggtcttggat
cttcagaacaagttgcaagaaaagtgtaaaatggttgatatcatgtcagcccagataagc
cacttggagaaagaacaaagtaaatttgcacagctcgcaagtaagaacgaaagtcgactt
ggccacatgcagaaaatgttggccagtcagacagataagctgatgaatattgaccaaaca
tcgcaacagacataccaaaggcaggaagagactgctcgagatgccaacattctgagagaa
tctatagaccacctgcagacccgaattagacagctggagttgcccggcagaactgctgga
ccaggcatgggagctgctagcttgactgaattaagtaaccagctgaagaggtttgacagt
ttactgagtgttcatgacgtgaggctggcagatatggacctacgctttcaactcttagaa
accgtcagctacaacggtaaactgatttggaagattcgcgactacaggcggcggaaacag
gaggctgttaatggaaaaacgttatccttgtatagccagccattttacacgggatatttt
ggatacaaaatgtgtgctcgagtttatctcaatggagatggtatgggcaaaggaacccac
ttgtcactgttttttgtcatcatgcgaggagaatatgatgcactattaccttggcctttt
aaacagaaagtaacgttgatgctgttagaccaaggacaggccaatcgccatttgggggat
gcctttaagccagaccccaacagcagcagttttaagcagccagtaggagaaatgaatatt
gcttcaggctgccctctttttgttgcacagactgtcttggaaagtggaacgtatattaaa
gatgacactatcttcattaaagtagtcgttgatacttcagacatgccagacccatga
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