Hemitrygon akajei (red stingray): 140726443
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Entry
140726443 CDS
T11019
Name
(RefSeq) short transient receptor potential channel 3-like isoform X1
KO
K04966
transient receptor potential cation channel subfamily C member 3
Organism
haka Hemitrygon akajei (red stingray)
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
haka04040
]
140726443
Ion channels [BR:
haka04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
140726443
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Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
Ank_4
Ank_5
Motif
Other DBs
NCBI-GeneID:
140726443
NCBI-ProteinID:
XP_072898951
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Position
4:74452931..74592985
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AA seq
928 aa
AA seq
DB search
MSEEERRCQVQTSVSFHEEENRRDGKEENGDLSSHHYNPKAEDKSLYGYPKTMQRVRNPA
VMQRRMTVLREKGRRQAVRGPTFMFNDRGTSLTPEEERFLDAAEYGNIPVVRRMLEENKS
LNVNCVDYMGQNALQLAVGNEHLEVTELLLKRDNLARIGDALLLAISKGYIRIVEAILNH
SGFEPSNRLTLSPCEQEMQDDDFYAYDEDGTRFSPDITPIILAAHCQKYEVVHMLLMKGA
RIEKPHDYFCKCTECVEKQKHDSFSHSRSRINAYKGLASPAYLSLSSEDPVHTALELSNE
LAKLANIEKEFKLKNKKVELVKGPHKVTSSNDYRKLSMQCKDFVVGVLDLCRDSEEVEAI
LNGDVEADQDEGHHCQRAGLTRVKLAIKYEVKKFVAHPNCQQQLLSIWYENLSGLREQPI
TMKCLVVLVIAIGLPFLAIGYWIAPCSKLGKILRSPFMKFVMHAASFIIFLCLLVFNASD
RFEGIKTLPNVTVLDYPEQVFRMKTTMFTWTEMLIMVWILGMMWTECKEIWTEGPREYIF
QMWNLLDFGMLSIFIAAFTARFLAFLEASKAQQFVDELVKEKNLSLVPLPPEVEYYTYAR
DRWVPSDPQIISEGLYAIAVVLSFSRIAYILPANESFGPLQISLGRTVKDIFKFMVIFIM
VFLAFMIGMFILYSYYLGAKVNPAFTTVEESFKTLFWSIFGLSEVSSVVLKYDHKFIENI
GYVLYGIYNVTMVVVLLNMLIAMINSSYQEIEDDADVEWKFARSKLWMFYFDHGKTLPPP
FSLVPTPKSCINLIVRIKNCLLGLFKCRRKRLKKDIEIGMMNSKSRLNLFAQSNLRISET
QSFNSIINQPTRYQQIMKRLIKRYVLKAQVDKENDEVNEGELKEIKQDISSLRYELLEDK
SQATEELAFLIQKLGEKLNTCLSKQKHQ
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaagaagagagaagatgccaggttcagacaagtgtgtccttccatgaagaagaa
aacagacgcgacgggaaagaggagaacggagatcttagttcgcatcattacaacccaaaa
gcagaggacaagagtctatatggatatccaaaaaccatgcaacgtgtcaggaacccagca
gtaatgcagcggagaatgacagtgctcagagagaaaggaaggaggcaggctgtgcgggga
ccaacattcatgttcaatgaccggggaacgagtttaaccccagaagaggagcgttttttg
gacgcagccgaatacgggaacatccccgttgtccggagaatgctagaggagaacaagtca
ctgaatgttaactgtgttgattacatggggcaaaatgccctccaactagcagttggaaat
gaacatctggaagtaacagagcttctcctgaagagggataacttggctcgaattggagat
gcgttattacttgctatcagtaaaggttacatacgaattgtggaagcaattttgaatcac
tctggatttgagcccagtaatcgtctgacccttagcccatgtgaacaagaaatgcaggat
gatgatttttatgcctatgatgaagatggcaccagattttctccagatatcaccccaata
atactggcagcgcactgccagaaatatgaagtggtgcatatgttgttgatgaagggagca
cggattgagaaaccccatgactatttctgcaaatgtactgaatgtgtggagaagcaaaag
cacgattcctttagtcactccagatccaggatcaatgcatacaaaggattagcaagccct
gcctatttgtcgttgtctagtgaggatccagtacatactgcactggaacttagtaatgaa
ttagccaagttggcaaacattgaaaaagaatttaagcttaaaaacaagaaagttgaattg
gtaaagggtccacacaaggtgacatcatcgaatgactatcgcaagctatctatgcagtgc
aaagactttgtcgttggtgtcctcgacctgtgccgagacagtgaggaggttgaagctatt
ctgaatggtgacgtggaagctgatcaagatgaaggacaccactgtcaaagagcaggcttg
acccgtgtcaaactggccatcaaatatgaagtcaaaaagtttgtagcccatccaaattgc
cagcagcagctactctcaatatggtacgaaaacctctcaggactacgggagcaacccatc
accatgaaatgccttgtggtgctcgttattgcaattggactcccatttcttgcaattggc
tactggattgccccatgtagcaagctggggaagattctaagaagtcccttcatgaagttt
gtgatgcatgcagcatccttcatcatctttctgtgtttactagtatttaatgcctctgac
agatttgaaggcatcaaaaccttacccaatgtcacagtcttggattatcctgaacaagtc
ttcagaatgaaaaccaccatgtttacttggacagaaatgctaatcatggtgtggatacta
ggcatgatgtggactgaatgtaaggaaatttggacagaaggaccacgggagtatattttc
caaatgtggaatcttctagattttggaatgctgtcaatttttatagctgcattcacagca
agattcctagcattcctggaagcttcaaaagcacaacagtttgtagatgaacttgtgaag
gagaaaaacctgtcacttgtgcctctgccaccggaagtggagtactacacctatgccaga
gatagatgggttccctccgatcctcagatcatttctgaaggcctctatgcaatagcagtt
gtccttagtttttcacgaatcgcttatatcctgcccgcaaatgaaagctttggtccgtta
caaatttcccttggaaggactgtgaaagatatattcaaattcatggtcatttttataatg
gtgttccttgctttcatgattgggatgtttatcctttattcctactaccttggtgcaaaa
gtgaatccagctttcacaacagttgaagaaagtttcaagacactattctggtccatcttc
ggtttgtctgaagtttcttctgttgtcctcaaatatgaccataaattcattgagaatatt
ggatatgtcttatatggaatatacaatgtcactatggtggtggttttgctcaacatgcta
attgccatgatcaatagctcatatcaggaaattgaggatgatgcagatgtggaatggaag
tttgcccgttcaaagctgtggatgttctactttgaccatgggaaaacactgccccctcca
ttcagtcttgtgcctactccaaagtcatgcatcaatttgatagtaagaatcaaaaactgt
ctccttggcctgttcaaatgcagaaggaaaagactgaagaaagacatagaaattggaatg
atgaattccaagtccaggctaaatctatttgcacagtctaatctaaggatttcagaaacc
caaagtttcaacagcattataaaccagccgactagatatcagcaaataatgaagcgactg
attaaacggtatgtcttgaaagcacaagttgataaagaaaacgatgaggttaatgaaggt
gaacttaaagaaatcaaacaggatatctcaagccttcgatatgaacttctggaagacaag
tctcaagcaaccgaggagctggctttcctcattcaaaagcttggtgaaaagcttaatacc
tgtctgtcaaaacaaaaacatcagtga
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